Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 BAK1P1-201ENST00000317045 636 ntBASIC17.09■□□□□ 0.33
PTPN18Q99952 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 TSPY25P-201ENST00000429463 745 ntBASIC17.09■□□□□ 0.33
PTPN18Q99952 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN18Q99952 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN18Q99952 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN18Q99952 RN7SL81P-201ENST00000493781 261 ntBASIC17.09■□□□□ 0.33
PTPN18Q99952 ORAOV1P1-201ENST00000503108 395 ntBASIC17.09■□□□□ 0.33
PTPN18Q99952 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PTPN18Q99952 AP000911.2-201ENST00000534330 502 ntBASIC17.09■□□□□ 0.33
PTPN18Q99952 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.09■□□□□ 0.33
PTPN18Q99952 DNM1P51-201ENST00000558149 522 ntBASIC17.09■□□□□ 0.33
PTPN18Q99952 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN18Q99952 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN18Q99952 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 AC018629.1-201ENST00000623381 1736 ntBASIC17.09■□□□□ 0.33
PTPN18Q99952 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PTPN18Q99952 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTPN18Q99952 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN18Q99952 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN18Q99952 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
PTPN18Q99952 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PTPN18Q99952 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN18Q99952 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PTPN18Q99952 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN18Q99952 NKILA-202ENST00000614771 2598 ntBASIC17.08■□□□□ 0.33
PTPN18Q99952 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PTPN18Q99952 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN18Q99952 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN18Q99952 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN18Q99952 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN18Q99952 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.08■□□□□ 0.33
PTPN18Q99952 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PTPN18Q99952 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN18Q99952 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN18Q99952 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN18Q99952 AC012508.2-201ENST00000567613 1472 ntBASIC17.08■□□□□ 0.32
PTPN18Q99952 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN18Q99952 KRT18P36-201ENST00000411618 1276 ntBASIC17.08■□□□□ 0.32
PTPN18Q99952 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN18Q99952 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN18Q99952 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.08■□□□□ 0.32
PTPN18Q99952 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN18Q99952 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.08■□□□□ 0.32
PTPN18Q99952 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN18Q99952 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN18Q99952 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN18Q99952 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN18Q99952 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN18Q99952 AC013726.1-201ENST00000563747 2285 ntBASIC17.08■□□□□ 0.32
PTPN18Q99952 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.08■□□□□ 0.32
PTPN18Q99952 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN18Q99952 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PTPN18Q99952 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN18Q99952 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN18Q99952 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTPN18Q99952 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PTPN18Q99952 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PTPN18Q99952 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN18Q99952 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN18Q99952 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 RNA5SP359-201ENST00000364838 113 ntBASIC17.07■□□□□ 0.32
PTPN18Q99952 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PTPN18Q99952 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 AC004837.1-201ENST00000446267 564 ntBASIC17.07■□□□□ 0.32
PTPN18Q99952 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN18Q99952 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN18Q99952 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN18Q99952 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.07■□□□□ 0.32
PTPN18Q99952 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms