Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H4Q96RI1 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 AC090505.1-201ENST00000430515 1834 ntBASIC14.38□□□□□ -0.11
NR1H4Q96RI1 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H4Q96RI1 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.37□□□□□ -0.11
NR1H4Q96RI1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H4Q96RI1 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms