Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC005229.1-201ENST00000392885 409 ntBASIC12.63□□□□□ -0.39
GAFA1Q96PS6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 BCRP2-202ENST00000447763 634 ntBASIC12.63□□□□□ -0.39
GAFA1Q96PS6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 AC026434.2-201ENST00000506094 1078 ntBASIC12.63□□□□□ -0.39
GAFA1Q96PS6 BCRP6-201ENST00000510112 632 ntBASIC12.63□□□□□ -0.39
GAFA1Q96PS6 BCRP7-201ENST00000511549 544 ntBASIC12.63□□□□□ -0.39
GAFA1Q96PS6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.63□□□□□ -0.39
GAFA1Q96PS6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 AC011270.2-201ENST00000624293 2550 ntBASIC12.62□□□□□ -0.39
GAFA1Q96PS6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 BTNL10-201ENST00000595971 695 ntBASIC12.62□□□□□ -0.39
GAFA1Q96PS6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 AL596257.1-201ENST00000641463 2694 ntBASIC12.62□□□□□ -0.39
GAFA1Q96PS6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.62□□□□□ -0.39
GAFA1Q96PS6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 PCDHA3-202ENST00000532566 4594 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms