Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 BAK1P1-201ENST00000317045 636 ntBASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 AL357563.1-201ENST00000404728 395 ntBASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 AC007326.1-201ENST00000604539 458 ntBASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 CROCCP1-201ENST00000426910 5675 ntBASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
TRIM43Q96BQ3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 MIR3188-201ENST00000583494 85 ntBASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 CICP11-201ENST00000434745 2827 ntBASIC16.23■□□□□ 0.19
TRIM43Q96BQ3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 AC004837.1-201ENST00000446267 564 ntBASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 FTH1P22-201ENST00000456305 520 ntBASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 RN7SL81P-201ENST00000493781 261 ntBASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 AC005041.3-201ENST00000606287 649 ntBASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 AP001527.2-201ENST00000614441 631 ntBASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 AC148477.9-201ENST00000623974 539 ntBASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM43Q96BQ3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms