Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.16■□□□□ 0.18
DDX1Q92499 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
DDX1Q92499 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
DDX1Q92499 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
DDX1Q92499 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.15■□□□□ 0.18
DDX1Q92499 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
DDX1Q92499 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.15■□□□□ 0.18
DDX1Q92499 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
DDX1Q92499 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 SOCS2P1-201ENST00000417727 557 ntBASIC16.15■□□□□ 0.18
DDX1Q92499 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.15■□□□□ 0.18
DDX1Q92499 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
DDX1Q92499 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 AP001582.1-201ENST00000525856 295 ntBASIC16.15■□□□□ 0.18
DDX1Q92499 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.15■□□□□ 0.18
DDX1Q92499 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.15■□□□□ 0.18
DDX1Q92499 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.15■□□□□ 0.18
DDX1Q92499 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.15■□□□□ 0.18
DDX1Q92499 CLUHP6-201ENST00000580789 941 ntBASIC16.15■□□□□ 0.18
DDX1Q92499 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.15■□□□□ 0.18
DDX1Q92499 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.15■□□□□ 0.18
DDX1Q92499 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
DDX1Q92499 GPR182-203ENST00000622922 591 ntBASIC16.15■□□□□ 0.18
DDX1Q92499 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.15■□□□□ 0.18
DDX1Q92499 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.15■□□□□ 0.18
DDX1Q92499 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
DDX1Q92499 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.15■□□□□ 0.18
DDX1Q92499 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.15■□□□□ 0.18
DDX1Q92499 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DDX1Q92499 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
DDX1Q92499 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
DDX1Q92499 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
DDX1Q92499 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.14■□□□□ 0.18
DDX1Q92499 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.14■□□□□ 0.18
DDX1Q92499 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
DDX1Q92499 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
DDX1Q92499 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.14■□□□□ 0.17
DDX1Q92499 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
DDX1Q92499 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.14■□□□□ 0.17
DDX1Q92499 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
DDX1Q92499 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.14■□□□□ 0.17
DDX1Q92499 BRWD1P1-201ENST00000401091 371 ntBASIC16.14■□□□□ 0.17
DDX1Q92499 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.14■□□□□ 0.17
DDX1Q92499 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
DDX1Q92499 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.14■□□□□ 0.17
DDX1Q92499 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.14■□□□□ 0.17
DDX1Q92499 RN7SL190P-201ENST00000582519 257 ntBASIC16.14■□□□□ 0.17
DDX1Q92499 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 AC133539.2-201ENST00000604757 467 ntBASIC16.14■□□□□ 0.17
DDX1Q92499 WFDC1-204ENST00000613603 549 ntBASIC16.14■□□□□ 0.17
DDX1Q92499 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.14■□□□□ 0.17
DDX1Q92499 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.14■□□□□ 0.17
DDX1Q92499 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
DDX1Q92499 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
DDX1Q92499 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms