Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 CICP23-201ENST00000605013 2741 ntBASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 EIF4HP1-201ENST00000453115 687 ntBASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 KRT8P19-201ENST00000551916 1455 ntBASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-3Q8TAU0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 AC007969.1-201ENST00000433675 447 ntBASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 U62317.3-201ENST00000608319 855 ntBASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 WASH3P-207ENST00000560956 1394 ntBASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-3Q8TAU0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms