Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 PTENP1-202ENST00000532280 3996 ntBASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 AC015922.1-201ENST00000421102 1152 ntBASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 AC010327.4-202ENST00000591484 748 ntBASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.1■□□□□ 0.01
CCNYL1Q8N7R7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 GRK6P1-201ENST00000400595 1711 ntBASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 RPL37AP1-201ENST00000412502 279 ntBASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 AC112482.1-201ENST00000492080 688 ntBASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 LINC01115-203ENST00000606068 577 ntBASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 AP001059.3-201ENST00000619053 235 ntBASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 BX640514.1-201ENST00000583223 1918 ntBASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 AC087386.2-201ENST00000623212 4637 ntBASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL1Q8N7R7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.08■□□□□ 0.01
CCNYL1Q8N7R7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCNYL1Q8N7R7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCNYL1Q8N7R7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCNYL1Q8N7R7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCNYL1Q8N7R7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCNYL1Q8N7R7 AL121723.1-201ENST00000445194 1519 ntBASIC15.08■□□□□ 0.01
CCNYL1Q8N7R7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCNYL1Q8N7R7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCNYL1Q8N7R7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.08■□□□□ 0
CCNYL1Q8N7R7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCNYL1Q8N7R7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms