Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 AC005324.6-201ENST00000587972 613 ntBASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 AC128714.1-201ENST00000637035 887 ntBASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 AL805961.1-203ENST00000641078 1258 ntBASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 AC068587.8-201ENST00000641239 219 ntBASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AC009093.2-202ENST00000620513 2079 ntBASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AC007274.2-201ENST00000421675 662 ntBASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 MAGEA5-201ENST00000446757 942 ntBASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 MARK2P5-201ENST00000507649 634 ntBASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AL161670.2-201ENST00000557650 1227 ntBASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AC100827.2-201ENST00000563214 1194 ntBASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AC079336.7-201ENST00000623428 1078 ntBASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 INE2-201ENST00000630399 1874 ntBASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 CICP11-201ENST00000434745 2827 ntBASIC15.63■□□□□ 0.09
NPAS3Q8IXF0 AC105917.1-201ENST00000506637 2539 ntBASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 MIR33B-201ENST00000385104 96 ntBASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 RPS2P36-201ENST00000456516 831 ntBASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 AC012618.1-201ENST00000461223 412 ntBASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.62■□□□□ 0.09
NPAS3Q8IXF0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 571.4 ms