Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC134407.3-201ENST00000624035 2139 ntBASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CROCCP3Q8IVE0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 GPX1P2-201ENST00000429271 606 ntBASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 MIR4313-201ENST00000580760 101 ntBASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 AL645728.2-201ENST00000641974 660 ntBASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CROCCP3Q8IVE0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CROCCP3Q8IVE0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CROCCP3Q8IVE0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CROCCP3Q8IVE0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CROCCP3Q8IVE0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CROCCP3Q8IVE0 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.83□□□□□ -0.19
CROCCP3Q8IVE0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 AL596275.1-201ENST00000423464 877 ntBASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 LAGE3P1-201ENST00000425356 484 ntBASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 MTDHP3-201ENST00000594186 672 ntBASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 AC069148.1-201ENST00000608741 768 ntBASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 AC004899.2-201ENST00000622993 3860 ntBASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms