Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 AC000095.1-201ENST00000603208 874 ntBASIC16.17■□□□□ 0.18
RNF135Q8IUD6 AP005019.2-201ENST00000615104 511 ntBASIC16.17■□□□□ 0.18
RNF135Q8IUD6 AP003419.4-201ENST00000616071 517 ntBASIC16.17■□□□□ 0.18
RNF135Q8IUD6 AC079336.7-201ENST00000623428 1078 ntBASIC16.17■□□□□ 0.18
RNF135Q8IUD6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 DRD5P1-201ENST00000456605 1438 ntBASIC16.17■□□□□ 0.18
RNF135Q8IUD6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 AP005117.1-202ENST00000581724 1908 ntBASIC16.17■□□□□ 0.18
RNF135Q8IUD6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 MIR600HG-201ENST00000449175 5984 ntBASIC16.17■□□□□ 0.18
RNF135Q8IUD6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF135Q8IUD6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 AC026740.1-201ENST00000607068 791 ntBASIC16.16■□□□□ 0.18
RNF135Q8IUD6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF135Q8IUD6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF135Q8IUD6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms