Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 AC011477.6-201ENST00000604980 1927 ntBASIC14.63□□□□□ -0.07
RAB43Q86YS6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 BCRP2-202ENST00000447763 634 ntBASIC14.63□□□□□ -0.07
RAB43Q86YS6 AC119751.2-201ENST00000504529 210 ntBASIC14.63□□□□□ -0.07
RAB43Q86YS6 BCRP6-201ENST00000510112 632 ntBASIC14.63□□□□□ -0.07
RAB43Q86YS6 BCRP7-201ENST00000511549 544 ntBASIC14.63□□□□□ -0.07
RAB43Q86YS6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB43Q86YS6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB43Q86YS6 AC106881.1-201ENST00000605849 3329 ntBASIC14.63□□□□□ -0.07
RAB43Q86YS6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 CICP24-201ENST00000605464 2705 ntBASIC14.62□□□□□ -0.07
RAB43Q86YS6 CICP14-201ENST00000629111 2732 ntBASIC14.62□□□□□ -0.07
RAB43Q86YS6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 AL133267.1-201ENST00000398220 340 ntBASIC14.62□□□□□ -0.07
RAB43Q86YS6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 MIR4259-201ENST00000584466 101 ntBASIC14.62□□□□□ -0.07
RAB43Q86YS6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 AC006486.2-201ENST00000624246 2199 ntBASIC14.62□□□□□ -0.07
RAB43Q86YS6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB43Q86YS6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB43Q86YS6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms