Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 GK-202ENST00000378941 458 ntTSL 3 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 AL139094.1-201ENST00000405549 1188 ntBASIC13.79□□□□□ -0.2
ATG4DQ86TL0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.79□□□□□ -0.2
ATG4DQ86TL0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 AP001582.1-201ENST00000525856 295 ntBASIC13.79□□□□□ -0.2
ATG4DQ86TL0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 AC133539.2-201ENST00000604757 467 ntBASIC13.79□□□□□ -0.2
ATG4DQ86TL0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 KRT8P14-201ENST00000414254 1442 ntBASIC13.79□□□□□ -0.2
ATG4DQ86TL0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 MTHFR-210ENST00000641407 2387 ntBASIC13.79□□□□□ -0.2
ATG4DQ86TL0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATG4DQ86TL0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 KRT17P7-201ENST00000451704 1104 ntBASIC13.78□□□□□ -0.2
ATG4DQ86TL0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 CU639417.3-201ENST00000624240 1404 ntBASIC13.78□□□□□ -0.2
ATG4DQ86TL0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 AC140479.7-201ENST00000636301 2332 ntBASIC13.78□□□□□ -0.2
ATG4DQ86TL0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATG4DQ86TL0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATG4DQ86TL0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms