Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 WASH3P-207ENST00000560956 1394 ntBASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3BQ7Z3V4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 RN7SKP230-201ENST00000365642 335 ntBASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 AL109954.1-202ENST00000564051 2148 ntBASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE3BQ7Z3V4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 AC005730.2-201ENST00000564549 1184 ntBASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 AL358472.3-201ENST00000608147 415 ntBASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3BQ7Z3V4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3BQ7Z3V4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3BQ7Z3V4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3BQ7Z3V4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.81■□□□□ 0.6
UBE3BQ7Z3V4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
UBE3BQ7Z3V4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
UBE3BQ7Z3V4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBE3BQ7Z3V4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
UBE3BQ7Z3V4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms