Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 RPSAP43-201ENST00000402237 625 ntBASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 AC211486.1-202ENST00000416371 468 ntBASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 RPL13P2-201ENST00000440687 659 ntBASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 KRT18P43-201ENST00000469825 1281 ntBASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 AC211476.1-201ENST00000503899 468 ntBASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 PTENP1-202ENST00000532280 3996 ntBASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMARCD3Q6STE5 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 REXO1L4P-201ENST00000605109 1937 ntBASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.96□□□□□ -0.18
SMARCD3Q6STE5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 MTHFR-210ENST00000641407 2387 ntBASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 RPL37AP1-201ENST00000412502 279 ntBASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 UPF3AP3-201ENST00000420996 769 ntBASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 BX842568.4-201ENST00000421222 227 ntBASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 AF228730.6-201ENST00000641497 218 ntBASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 AC084121.3-201ENST00000641716 218 ntBASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMARCD3Q6STE5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 AC018529.2-202ENST00000611482 3087 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms