Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 AL049840.4-201ENST00000602422 811 ntBASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKAL1Q5VV42 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 MIR943-201ENST00000401286 94 ntBASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 VDAC1P7-201ENST00000462417 847 ntBASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDKAL1Q5VV42 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.58■□□□□ 0.25
CDKAL1Q5VV42 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 FAM86GP-201ENST00000448322 971 ntBASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 AC004890.2-204ENST00000481968 304 ntBASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 AC135586.1-201ENST00000539323 574 ntBASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 DUX4L27-201ENST00000554796 1261 ntBASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 AC036164.1-201ENST00000570544 333 ntBASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKAL1Q5VV42 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms