Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 AC245100.3-201ENST00000441281 285 ntBASIC18.23■□□□□ 0.51
RFX7Q2KHR2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 CICP24-201ENST00000605464 2705 ntBASIC18.23■□□□□ 0.51
RFX7Q2KHR2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 AC023824.1-201ENST00000562945 2975 ntBASIC18.22■□□□□ 0.51
RFX7Q2KHR2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 AL390755.1-201ENST00000623716 2027 ntBASIC18.22■□□□□ 0.51
RFX7Q2KHR2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 BCYRN1-201ENST00000418539 200 ntBASIC18.22■□□□□ 0.51
RFX7Q2KHR2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 CICP23-201ENST00000605013 2741 ntBASIC18.22■□□□□ 0.51
RFX7Q2KHR2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 AC018442.1-201ENST00000421439 2061 ntBASIC18.22■□□□□ 0.51
RFX7Q2KHR2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX7Q2KHR2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 HOMER2P2-201ENST00000451621 847 ntBASIC18.21■□□□□ 0.51
RFX7Q2KHR2 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 AC103810.3-201ENST00000583567 96 ntBASIC18.21■□□□□ 0.51
RFX7Q2KHR2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 AL118558.3-201ENST00000607414 1079 ntBASIC18.21■□□□□ 0.51
RFX7Q2KHR2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 AL023775.1-201ENST00000454907 1746 ntBASIC18.21■□□□□ 0.51
RFX7Q2KHR2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFX7Q2KHR2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.21■□□□□ 0.5
RFX7Q2KHR2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms