Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 AC097359.3-201ENST00000603982 1210 ntBASIC11.75□□□□□ -0.53
HIST1H1AQ02539 RN7SL828P-201ENST00000607615 303 ntBASIC11.75□□□□□ -0.53
HIST1H1AQ02539 AC007967.4-201ENST00000614700 386 ntBASIC11.75□□□□□ -0.53
HIST1H1AQ02539 AC009093.7-201ENST00000623853 1223 ntBASIC11.75□□□□□ -0.53
HIST1H1AQ02539 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 AL023775.1-201ENST00000454907 1746 ntBASIC11.74□□□□□ -0.53
HIST1H1AQ02539 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 AC023024.2-201ENST00000623561 1993 ntBASIC11.74□□□□□ -0.53
HIST1H1AQ02539 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 DMBT1P1-203ENST00000636837 4628 ntBASIC11.74□□□□□ -0.53
HIST1H1AQ02539 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.74□□□□□ -0.53
HIST1H1AQ02539 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 RPSAP43-201ENST00000402237 625 ntBASIC11.74□□□□□ -0.53
HIST1H1AQ02539 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 SPDYE7P-202ENST00000420373 878 ntBASIC11.74□□□□□ -0.53
HIST1H1AQ02539 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 BANF1P1-201ENST00000553684 263 ntBASIC11.74□□□□□ -0.53
HIST1H1AQ02539 MIR4453-201ENST00000584019 89 ntBASIC11.74□□□□□ -0.53
HIST1H1AQ02539 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 ZBED1P1-201ENST00000502364 1930 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms