Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CHCHD2P3-201ENST00000603038 451 ntBASIC13.31□□□□□ -0.28
HIST1H3AP68431 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 AC007541.1-201ENST00000570282 1469 ntBASIC13.3□□□□□ -0.28
HIST1H3AP68431 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 API5-211ENST00000534695 560 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 AL359711.2-201ENST00000563105 872 ntBASIC13.3□□□□□ -0.28
HIST1H3AP68431 SPDYE22P-201ENST00000582158 798 ntBASIC13.3□□□□□ -0.28
HIST1H3AP68431 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 RN7SL204P-201ENST00000582831 262 ntBASIC13.3□□□□□ -0.28
HIST1H3AP68431 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 LINC02560-201ENST00000596379 459 ntBASIC13.3□□□□□ -0.28
HIST1H3AP68431 AC008761.3-201ENST00000624803 892 ntBASIC13.3□□□□□ -0.28
HIST1H3AP68431 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 KRT8P14-201ENST00000414254 1442 ntBASIC13.3□□□□□ -0.28
HIST1H3AP68431 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H3AP68431 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H3AP68431 AL137783.1-201ENST00000623494 1896 ntBASIC13.29□□□□□ -0.28
HIST1H3AP68431 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 SOCS2P1-201ENST00000417727 557 ntBASIC13.29□□□□□ -0.28
HIST1H3AP68431 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms