Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB5BP61020 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB5BP61020 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC11.91□□□□□ -0.5
RAB5BP61020 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB5BP61020 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB5BP61020 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB5BP61020 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
RAB5BP61020 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB5BP61020 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 AL353593.2-201ENST00000602529 1483 ntBASIC11.9□□□□□ -0.5
RAB5BP61020 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB5BP61020 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RAB5BP61020 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB5BP61020 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 AC090192.1-201ENST00000517740 490 ntBASIC11.9□□□□□ -0.5
RAB5BP61020 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB5BP61020 AC010536.1-201ENST00000538868 2611 ntBASIC11.9□□□□□ -0.5
RAB5BP61020 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB5BP61020 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RAB5BP61020 FAM197Y4-202ENST00000622692 608 ntBASIC11.9□□□□□ -0.5
RAB5BP61020 DECR2-212ENST00000627716 352 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB5BP61020 CSPG4P13-202ENST00000567704 4801 ntBASIC11.9□□□□□ -0.5
RAB5BP61020 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RAB5BP61020 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
RAB5BP61020 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RAB5BP61020 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.9□□□□□ -0.5
RAB5BP61020 AC092117.1-201ENST00000621230 3250 ntBASIC11.9□□□□□ -0.5
RAB5BP61020 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RAB5BP61020 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB5BP61020 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.9□□□□□ -0.5
RAB5BP61020 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
RAB5BP61020 TOP3BP1-201ENST00000420768 1380 ntBASIC11.9□□□□□ -0.5
RAB5BP61020 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
RAB5BP61020 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RAB5BP61020 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
RAB5BP61020 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB5BP61020 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB5BP61020 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB5BP61020 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RAB5BP61020 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
RAB5BP61020 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB5BP61020 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RAB5BP61020 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB5BP61020 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB5BP61020 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RAB5BP61020 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB5BP61020 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB5BP61020 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB5BP61020 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RAB5BP61020 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms