Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.84■□□□□ 0.77
RIPK4P57078 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
RIPK4P57078 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RIPK4P57078 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RIPK4P57078 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.84■□□□□ 0.77
RIPK4P57078 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.84■□□□□ 0.77
RIPK4P57078 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.84■□□□□ 0.77
RIPK4P57078 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.84■□□□□ 0.77
RIPK4P57078 AC008687.7-202ENST00000637404 953 ntBASIC19.84■□□□□ 0.77
RIPK4P57078 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RIPK4P57078 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK4P57078 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK4P57078 DBET-201ENST00000630918 3363 ntBASIC19.83■□□□□ 0.77
RIPK4P57078 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK4P57078 AHCYP2-201ENST00000430630 1300 ntBASIC19.83■□□□□ 0.77
RIPK4P57078 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK4P57078 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.83■□□□□ 0.77
RIPK4P57078 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK4P57078 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.83■□□□□ 0.77
RIPK4P57078 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.83■□□□□ 0.77
RIPK4P57078 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK4P57078 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK4P57078 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.83■□□□□ 0.77
RIPK4P57078 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.83■□□□□ 0.77
RIPK4P57078 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK4P57078 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.83■□□□□ 0.77
RIPK4P57078 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RIPK4P57078 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.83■□□□□ 0.77
RIPK4P57078 AC079316.1-201ENST00000548397 411 ntBASIC19.83■□□□□ 0.77
RIPK4P57078 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.83■□□□□ 0.77
RIPK4P57078 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RIPK4P57078 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.83■□□□□ 0.77
RIPK4P57078 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.83■□□□□ 0.77
RIPK4P57078 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.83■□□□□ 0.77
RIPK4P57078 MIR6752-201ENST00000618442 71 ntBASIC19.83■□□□□ 0.77
RIPK4P57078 LINC02228-204ENST00000642115 2962 ntBASIC19.83■□□□□ 0.77
RIPK4P57078 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.83■□□□□ 0.76
RIPK4P57078 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.83■□□□□ 0.76
RIPK4P57078 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.83■□□□□ 0.76
RIPK4P57078 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RIPK4P57078 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIPK4P57078 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.83■□□□□ 0.76
RIPK4P57078 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.83■□□□□ 0.76
RIPK4P57078 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RIPK4P57078 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RIPK4P57078 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RIPK4P57078 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.82■□□□□ 0.76
RIPK4P57078 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RIPK4P57078 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.82■□□□□ 0.76
RIPK4P57078 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.82■□□□□ 0.76
RIPK4P57078 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.82■□□□□ 0.76
RIPK4P57078 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RIPK4P57078 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.82■□□□□ 0.76
RIPK4P57078 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RIPK4P57078 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.82■□□□□ 0.76
RIPK4P57078 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.82■□□□□ 0.76
RIPK4P57078 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RIPK4P57078 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.81■□□□□ 0.76
RIPK4P57078 C1R-202ENST00000536053 2347 ntTSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RIPK4P57078 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms