Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.75□□□□□ -0.21
CASP6P55212 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.75□□□□□ -0.21
CASP6P55212 AL662890.1-201ENST00000396818 632 ntBASIC13.75□□□□□ -0.21
CASP6P55212 AC079178.1-201ENST00000420915 656 ntBASIC13.75□□□□□ -0.21
CASP6P55212 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.75□□□□□ -0.21
CASP6P55212 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.75□□□□□ -0.21
CASP6P55212 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.75□□□□□ -0.21
CASP6P55212 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.75□□□□□ -0.21
CASP6P55212 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.75□□□□□ -0.21
CASP6P55212 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.75□□□□□ -0.21
CASP6P55212 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.75□□□□□ -0.21
CASP6P55212 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.75□□□□□ -0.21
CASP6P55212 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CASP6P55212 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 ECM1P1-201ENST00000604092 1279 ntBASIC13.75□□□□□ -0.21
CASP6P55212 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CASP6P55212 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CASP6P55212 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.75□□□□□ -0.21
CASP6P55212 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.75□□□□□ -0.21
CASP6P55212 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 CICP13-201ENST00000422015 2789 ntBASIC13.75□□□□□ -0.21
CASP6P55212 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.75□□□□□ -0.21
CASP6P55212 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.75□□□□□ -0.21
CASP6P55212 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CASP6P55212 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.75□□□□□ -0.21
CASP6P55212 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.74□□□□□ -0.21
CASP6P55212 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.74□□□□□ -0.21
CASP6P55212 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CASP6P55212 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.74□□□□□ -0.21
CASP6P55212 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CASP6P55212 AL645937.2-201ENST00000396808 931 ntBASIC13.74□□□□□ -0.21
CASP6P55212 AC004945.1-201ENST00000416738 983 ntBASIC13.74□□□□□ -0.21
CASP6P55212 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.74□□□□□ -0.21
CASP6P55212 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CASP6P55212 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.74□□□□□ -0.21
CASP6P55212 POM121L10P-201ENST00000436994 1285 ntBASIC13.74□□□□□ -0.21
CASP6P55212 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.74□□□□□ -0.21
CASP6P55212 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.74□□□□□ -0.21
CASP6P55212 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.74□□□□□ -0.21
CASP6P55212 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CASP6P55212 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.74□□□□□ -0.21
CASP6P55212 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.74□□□□□ -0.21
CASP6P55212 RN7SL190P-201ENST00000582519 257 ntBASIC13.74□□□□□ -0.21
CASP6P55212 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.74□□□□□ -0.21
CASP6P55212 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.74□□□□□ -0.21
CASP6P55212 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.74□□□□□ -0.21
CASP6P55212 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.74□□□□□ -0.21
CASP6P55212 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CASP6P55212 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CASP6P55212 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CASP6P55212 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CASP6P55212 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CASP6P55212 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.74□□□□□ -0.21
CASP6P55212 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.74□□□□□ -0.21
CASP6P55212 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CASP6P55212 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.74□□□□□ -0.21
CASP6P55212 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CASP6P55212 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CASP6P55212 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CASP6P55212 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CASP6P55212 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CASP6P55212 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms