Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.33■□□□□ 0.2
VCPP55072 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
VCPP55072 AC128714.1-201ENST00000637035 887 ntBASIC16.33■□□□□ 0.2
VCPP55072 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.33■□□□□ 0.2
VCPP55072 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCPP55072 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VCPP55072 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCPP55072 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCPP55072 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCPP55072 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.33■□□□□ 0.2
VCPP55072 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.33■□□□□ 0.2
VCPP55072 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.33■□□□□ 0.2
VCPP55072 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VCPP55072 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.33■□□□□ 0.2
VCPP55072 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCPP55072 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCPP55072 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VCPP55072 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCPP55072 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VCPP55072 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCPP55072 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VCPP55072 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
VCPP55072 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCPP55072 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.32■□□□□ 0.2
VCPP55072 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCPP55072 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VCPP55072 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.32■□□□□ 0.2
VCPP55072 AC005077.2-201ENST00000449786 690 ntBASIC16.32■□□□□ 0.2
VCPP55072 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
VCPP55072 AKR7A2P1-201ENST00000460134 915 ntBASIC16.32■□□□□ 0.2
VCPP55072 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VCPP55072 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VCPP55072 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VCPP55072 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VCPP55072 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.32■□□□□ 0.2
VCPP55072 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.32■□□□□ 0.2
VCPP55072 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.32■□□□□ 0.2
VCPP55072 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.32■□□□□ 0.2
VCPP55072 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.32■□□□□ 0.2
VCPP55072 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VCPP55072 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.32■□□□□ 0.2
VCPP55072 AC244452.3-201ENST00000636814 210 ntBASIC16.32■□□□□ 0.2
VCPP55072 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.32■□□□□ 0.2
VCPP55072 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.32■□□□□ 0.2
VCPP55072 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VCPP55072 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCPP55072 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.32■□□□□ 0.2
VCPP55072 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCPP55072 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VCPP55072 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.31■□□□□ 0.2
VCPP55072 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.31■□□□□ 0.2
VCPP55072 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.31■□□□□ 0.2
VCPP55072 AC136604.1-201ENST00000418535 575 ntBASIC16.31■□□□□ 0.2
VCPP55072 AC016694.1-201ENST00000434179 700 ntBASIC16.31■□□□□ 0.2
VCPP55072 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.31■□□□□ 0.2
VCPP55072 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.31■□□□□ 0.2
VCPP55072 RPS2P36-201ENST00000456516 831 ntBASIC16.31■□□□□ 0.2
VCPP55072 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.31■□□□□ 0.2
VCPP55072 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.31■□□□□ 0.2
VCPP55072 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.31■□□□□ 0.2
VCPP55072 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.31■□□□□ 0.2
VCPP55072 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.31■□□□□ 0.2
VCPP55072 SPCS2P2-201ENST00000603270 608 ntBASIC16.31■□□□□ 0.2
VCPP55072 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
VCPP55072 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VCPP55072 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCPP55072 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.31■□□□□ 0.2
VCPP55072 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
VCPP55072 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.31■□□□□ 0.2
VCPP55072 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VCPP55072 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VCPP55072 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms