Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.63□□□□□ -0.23
GBX2P52951 DGCR9-201ENST00000609630 2415 ntBASIC13.63□□□□□ -0.23
GBX2P52951 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
GBX2P52951 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.63□□□□□ -0.23
GBX2P52951 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.63□□□□□ -0.23
GBX2P52951 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.63□□□□□ -0.23
GBX2P52951 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.63□□□□□ -0.23
GBX2P52951 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
GBX2P52951 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.63□□□□□ -0.23
GBX2P52951 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 SPDYE17-201ENST00000412399 783 ntBASIC13.63□□□□□ -0.23
GBX2P52951 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.63□□□□□ -0.23
GBX2P52951 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.63□□□□□ -0.23
GBX2P52951 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.63□□□□□ -0.23
GBX2P52951 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.63□□□□□ -0.23
GBX2P52951 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
GBX2P52951 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.63□□□□□ -0.23
GBX2P52951 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.63□□□□□ -0.23
GBX2P52951 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.63□□□□□ -0.23
GBX2P52951 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 AL645728.2-202ENST00000641679 227 ntBASIC13.63□□□□□ -0.23
GBX2P52951 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
GBX2P52951 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GBX2P52951 AL023775.1-201ENST00000454907 1746 ntBASIC13.63□□□□□ -0.23
GBX2P52951 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.63□□□□□ -0.23
GBX2P52951 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.63□□□□□ -0.23
GBX2P52951 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.63□□□□□ -0.23
GBX2P52951 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
GBX2P52951 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
GBX2P52951 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GBX2P52951 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
GBX2P52951 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 AC138969.3-201ENST00000546612 1459 ntBASIC13.62□□□□□ -0.23
GBX2P52951 AC138932.2-201ENST00000548268 1459 ntBASIC13.62□□□□□ -0.23
GBX2P52951 AC126755.4-201ENST00000549796 1459 ntBASIC13.62□□□□□ -0.23
GBX2P52951 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 COL6A4P2-202ENST00000504443 2753 ntBASIC13.62□□□□□ -0.23
GBX2P52951 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.62□□□□□ -0.23
GBX2P52951 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.62□□□□□ -0.23
GBX2P52951 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.62□□□□□ -0.23
GBX2P52951 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GBX2P52951 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GBX2P52951 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.62□□□□□ -0.23
GBX2P52951 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.62□□□□□ -0.23
GBX2P52951 HIST3H2BA-201ENST00000436555 524 ntBASIC13.62□□□□□ -0.23
GBX2P52951 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.62□□□□□ -0.23
GBX2P52951 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.62□□□□□ -0.23
GBX2P52951 AC009078.2-202ENST00000463353 338 ntBASIC13.62□□□□□ -0.23
GBX2P52951 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.62□□□□□ -0.23
GBX2P52951 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
GBX2P52951 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GBX2P52951 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms