Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP98P52948 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.47■□□□□ 0.55
NUP98P52948 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NUP98P52948 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP98P52948 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP98P52948 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP98P52948 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP98P52948 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP98P52948 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP98P52948 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
NUP98P52948 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP98P52948 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.47■□□□□ 0.55
NUP98P52948 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 AC239868.1-201ENST00000369385 493 ntBASIC18.46■□□□□ 0.55
NUP98P52948 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.46■□□□□ 0.55
NUP98P52948 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.46■□□□□ 0.55
NUP98P52948 AC078991.1-201ENST00000437297 610 ntBASIC18.46■□□□□ 0.55
NUP98P52948 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.46■□□□□ 0.55
NUP98P52948 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.46■□□□□ 0.55
NUP98P52948 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.46■□□□□ 0.55
NUP98P52948 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.46■□□□□ 0.55
NUP98P52948 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.46■□□□□ 0.55
NUP98P52948 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.46■□□□□ 0.55
NUP98P52948 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.46■□□□□ 0.55
NUP98P52948 FAM90A2P-201ENST00000511144 1395 ntBASIC18.46■□□□□ 0.55
NUP98P52948 FAM90A25P-201ENST00000528404 1395 ntBASIC18.46■□□□□ 0.55
NUP98P52948 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.46■□□□□ 0.55
NUP98P52948 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NUP98P52948 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 LINC00528-201ENST00000600723 2160 ntBASIC18.46■□□□□ 0.55
NUP98P52948 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.46■□□□□ 0.55
NUP98P52948 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NUP98P52948 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
NUP98P52948 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.46■□□□□ 0.55
NUP98P52948 AC092135.3-201ENST00000624151 1846 ntBASIC18.46■□□□□ 0.55
NUP98P52948 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.46■□□□□ 0.55
NUP98P52948 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NUP98P52948 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NUP98P52948 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.46■□□□□ 0.55
NUP98P52948 AL035414.1-201ENST00000451327 857 ntBASIC18.46■□□□□ 0.55
NUP98P52948 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.46■□□□□ 0.55
NUP98P52948 AC008723.1-201ENST00000506922 207 ntBASIC18.46■□□□□ 0.55
NUP98P52948 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.46■□□□□ 0.55
NUP98P52948 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.46■□□□□ 0.55
NUP98P52948 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.46■□□□□ 0.55
NUP98P52948 AC242376.2-201ENST00000619355 883 ntBASIC18.46■□□□□ 0.55
NUP98P52948 AC011491.1-203ENST00000637688 543 ntBASIC18.46■□□□□ 0.55
NUP98P52948 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.46■□□□□ 0.55
NUP98P52948 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NUP98P52948 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.45■□□□□ 0.54
NUP98P52948 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUP98P52948 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP98P52948 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUP98P52948 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.45■□□□□ 0.54
NUP98P52948 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP98P52948 TSPY25P-201ENST00000429463 745 ntBASIC18.45■□□□□ 0.54
NUP98P52948 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.45■□□□□ 0.54
NUP98P52948 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUP98P52948 POU5F1P2-201ENST00000521750 823 ntBASIC18.45■□□□□ 0.54
NUP98P52948 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUP98P52948 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.45■□□□□ 0.54
NUP98P52948 MIR4522-201ENST00000584932 87 ntBASIC18.45■□□□□ 0.54
NUP98P52948 MIR7845-201ENST00000618396 99 ntBASIC18.45■□□□□ 0.54
NUP98P52948 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.45■□□□□ 0.54
NUP98P52948 AC005618.3-201ENST00000624928 458 ntBASIC18.45■□□□□ 0.54
NUP98P52948 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NUP98P52948 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.45■□□□□ 0.54
NUP98P52948 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.45■□□□□ 0.54
NUP98P52948 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.45■□□□□ 0.54
NUP98P52948 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP98P52948 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
NUP98P52948 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.45■□□□□ 0.54
NUP98P52948 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUP98P52948 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.45■□□□□ 0.54
NUP98P52948 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.45■□□□□ 0.54
NUP98P52948 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUP98P52948 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUP98P52948 MRPL37P1-201ENST00000592451 1337 ntBASIC18.45■□□□□ 0.54
NUP98P52948 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
NUP98P52948 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms