Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNA3P52797 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.22□□□□□ -0.13
EFNA3P52797 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNA3P52797 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNA3P52797 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.22□□□□□ -0.13
EFNA3P52797 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNA3P52797 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNA3P52797 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNA3P52797 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.22□□□□□ -0.13
EFNA3P52797 RN7SL48P-201ENST00000579283 293 ntBASIC14.22□□□□□ -0.13
EFNA3P52797 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNA3P52797 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
EFNA3P52797 ENPP7P14-201ENST00000621765 1040 ntBASIC14.22□□□□□ -0.13
EFNA3P52797 AC006453.4-201ENST00000636949 1252 ntBASIC14.22□□□□□ -0.13
EFNA3P52797 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNA3P52797 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.22□□□□□ -0.13
EFNA3P52797 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNA3P52797 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
EFNA3P52797 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNA3P52797 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNA3P52797 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNA3P52797 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
EFNA3P52797 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
EFNA3P52797 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
EFNA3P52797 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNA3P52797 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNA3P52797 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNA3P52797 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
EFNA3P52797 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNA3P52797 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
EFNA3P52797 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNA3P52797 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNA3P52797 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNA3P52797 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.21□□□□□ -0.13
EFNA3P52797 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
EFNA3P52797 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
EFNA3P52797 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
EFNA3P52797 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNA3P52797 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNA3P52797 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 MIR1202-201ENST00000408529 83 ntBASIC14.21□□□□□ -0.13
EFNA3P52797 MIR1908-201ENST00000410394 80 ntBASIC14.21□□□□□ -0.13
EFNA3P52797 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNA3P52797 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNA3P52797 RNA5SP412-201ENST00000516234 123 ntBASIC14.21□□□□□ -0.13
EFNA3P52797 AC022616.1-201ENST00000518688 554 ntBASIC14.21□□□□□ -0.13
EFNA3P52797 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.21□□□□□ -0.13
EFNA3P52797 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNA3P52797 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.21□□□□□ -0.13
EFNA3P52797 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNA3P52797 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
EFNA3P52797 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNA3P52797 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNA3P52797 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
EFNA3P52797 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
EFNA3P52797 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.21□□□□□ -0.14
EFNA3P52797 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.21□□□□□ -0.14
EFNA3P52797 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
EFNA3P52797 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNA3P52797 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNA3P52797 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 AC012508.2-201ENST00000567613 1472 ntBASIC14.2□□□□□ -0.14
EFNA3P52797 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNA3P52797 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
EFNA3P52797 TSPY26P-202ENST00000565928 3884 ntBASIC14.2□□□□□ -0.14
EFNA3P52797 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms