Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
USP11P51784 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
USP11P51784 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.13■□□□□ 0.33
USP11P51784 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
USP11P51784 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
USP11P51784 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.12■□□□□ 0.33
USP11P51784 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.12■□□□□ 0.33
USP11P51784 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 FER1L4-210ENST00000615531 5998 ntBASIC17.12■□□□□ 0.33
USP11P51784 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
USP11P51784 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.12■□□□□ 0.33
USP11P51784 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
USP11P51784 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.12■□□□□ 0.33
USP11P51784 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.12■□□□□ 0.33
USP11P51784 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.12■□□□□ 0.33
USP11P51784 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 FTLP10-202ENST00000505798 471 ntBASIC17.12■□□□□ 0.33
USP11P51784 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.12■□□□□ 0.33
USP11P51784 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.12■□□□□ 0.33
USP11P51784 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.12■□□□□ 0.33
USP11P51784 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.12■□□□□ 0.33
USP11P51784 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.12■□□□□ 0.33
USP11P51784 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.12■□□□□ 0.33
USP11P51784 ECM1P1-201ENST00000604092 1279 ntBASIC17.12■□□□□ 0.33
USP11P51784 AC138466.3-201ENST00000619983 221 ntBASIC17.12■□□□□ 0.33
USP11P51784 AC138951.2-201ENST00000623455 1161 ntBASIC17.12■□□□□ 0.33
USP11P51784 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.12■□□□□ 0.33
USP11P51784 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
USP11P51784 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
USP11P51784 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
USP11P51784 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.12■□□□□ 0.33
USP11P51784 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
USP11P51784 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP11P51784 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
USP11P51784 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
USP11P51784 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.11■□□□□ 0.33
USP11P51784 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP11P51784 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 AC099063.4-201ENST00000641099 1602 ntBASIC17.11■□□□□ 0.33
USP11P51784 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
USP11P51784 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
USP11P51784 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 MIR658-201ENST00000385210 100 ntBASIC17.11■□□□□ 0.33
USP11P51784 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
USP11P51784 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.11■□□□□ 0.33
USP11P51784 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.11■□□□□ 0.33
USP11P51784 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 AL590640.2-201ENST00000457038 527 ntBASIC17.11■□□□□ 0.33
USP11P51784 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.11■□□□□ 0.33
USP11P51784 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.11■□□□□ 0.33
USP11P51784 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.11■□□□□ 0.33
USP11P51784 MIR4259-201ENST00000584466 101 ntBASIC17.11■□□□□ 0.33
USP11P51784 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.11■□□□□ 0.33
USP11P51784 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 AC133552.6-201ENST00000613406 534 ntBASIC17.11■□□□□ 0.33
USP11P51784 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.11■□□□□ 0.33
USP11P51784 AC008687.7-202ENST00000637404 953 ntBASIC17.11■□□□□ 0.33
USP11P51784 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
USP11P51784 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.11■□□□□ 0.33
USP11P51784 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.11■□□□□ 0.33
USP11P51784 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP11P51784 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms