Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
SMARCA4P51532 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA4P51532 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC26.29■■□□□ 1.8
SMARCA4P51532 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC26.29■■□□□ 1.8
SMARCA4P51532 AC106047.2-201ENST00000511723 743 ntBASIC26.29■■□□□ 1.8
SMARCA4P51532 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC26.29■■□□□ 1.8
SMARCA4P51532 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
SMARCA4P51532 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC26.29■■□□□ 1.8
SMARCA4P51532 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC26.29■■□□□ 1.8
SMARCA4P51532 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC26.29■■□□□ 1.8
SMARCA4P51532 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
SMARCA4P51532 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA4P51532 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC26.29■■□□□ 1.8
SMARCA4P51532 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA4P51532 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA4P51532 SSR4P1-203ENST00000599569 2260 ntBASIC26.29■■□□□ 1.8
SMARCA4P51532 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA4P51532 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA4P51532 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA4P51532 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC26.29■■□□□ 1.8
SMARCA4P51532 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
SMARCA4P51532 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCA4P51532 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC26.29■■□□□ 1.8
SMARCA4P51532 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC26.28■■□□□ 1.8
SMARCA4P51532 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SMARCA4P51532 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 AL135901.1-201ENST00000451812 333 ntBASIC26.28■■□□□ 1.8
SMARCA4P51532 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC26.28■■□□□ 1.8
SMARCA4P51532 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SMARCA4P51532 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC26.28■■□□□ 1.8
SMARCA4P51532 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 MRPL37P1-201ENST00000592451 1337 ntBASIC26.28■■□□□ 1.8
SMARCA4P51532 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC26.28■■□□□ 1.8
SMARCA4P51532 AC126365.1-201ENST00000578585 1514 ntBASIC26.28■■□□□ 1.8
SMARCA4P51532 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SMARCA4P51532 NAA40-205ENST00000539656 577 ntTSL 4 BASIC26.28■■□□□ 1.8
SMARCA4P51532 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC26.28■■□□□ 1.8
SMARCA4P51532 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
SMARCA4P51532 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCA4P51532 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SMARCA4P51532 AC092135.3-201ENST00000624151 1846 ntBASIC26.27■■□□□ 1.8
SMARCA4P51532 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA4P51532 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA4P51532 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SMARCA4P51532 AGPAT5P1-201ENST00000455855 1019 ntBASIC26.27■■□□□ 1.8
SMARCA4P51532 IGHV1-12-201ENST00000518307 205 ntBASIC26.27■■□□□ 1.8
SMARCA4P51532 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC26.27■■□□□ 1.8
SMARCA4P51532 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
SMARCA4P51532 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC26.27■■□□□ 1.8
SMARCA4P51532 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA4P51532 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SMARCA4P51532 AC139712.1-201ENST00000378256 1875 ntBASIC26.27■■□□□ 1.8
SMARCA4P51532 LINC01101-201ENST00000622953 1884 ntBASIC26.27■■□□□ 1.8
SMARCA4P51532 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCA4P51532 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
SMARCA4P51532 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
SMARCA4P51532 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA4P51532 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA4P51532 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA4P51532 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC26.26■■□□□ 1.79
SMARCA4P51532 AC244197.1-201ENST00000456494 951 ntBASIC26.26■■□□□ 1.79
SMARCA4P51532 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA4P51532 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC26.26■■□□□ 1.79
SMARCA4P51532 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA4P51532 HERC2P11-201ENST00000562845 725 ntBASIC26.26■■□□□ 1.79
SMARCA4P51532 AC100756.2-201ENST00000569537 736 ntBASIC26.26■■□□□ 1.79
SMARCA4P51532 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC26.26■■□□□ 1.79
SMARCA4P51532 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC26.26■■□□□ 1.79
SMARCA4P51532 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC26.26■■□□□ 1.79
SMARCA4P51532 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA4P51532 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA4P51532 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCA4P51532 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC26.26■■□□□ 1.79
SMARCA4P51532 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
SMARCA4P51532 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC26.26■■□□□ 1.79
SMARCA4P51532 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC26.25■■□□□ 1.79
SMARCA4P51532 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SMARCA4P51532 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC26.25■■□□□ 1.79
SMARCA4P51532 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
SMARCA4P51532 ACTBP7-201ENST00000418351 1124 ntBASIC26.25■■□□□ 1.79
SMARCA4P51532 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC26.25■■□□□ 1.79
SMARCA4P51532 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMARCA4P51532 AC007250.1-201ENST00000608934 338 ntBASIC26.25■■□□□ 1.79
SMARCA4P51532 AP001527.2-201ENST00000614441 631 ntBASIC26.25■■□□□ 1.79
SMARCA4P51532 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMARCA4P51532 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
SMARCA4P51532 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SMARCA4P51532 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC26.25■■□□□ 1.79
SMARCA4P51532 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms