Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
ARCN1P48444 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.24■□□□□ 0.03
ARCN1P48444 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
ARCN1P48444 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ARCN1P48444 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
ARCN1P48444 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 MYCLP2-201ENST00000449268 967 ntBASIC15.24■□□□□ 0.03
ARCN1P48444 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.24■□□□□ 0.03
ARCN1P48444 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.24■□□□□ 0.03
ARCN1P48444 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.24■□□□□ 0.03
ARCN1P48444 AC005225.4-201ENST00000557330 545 ntBASIC15.24■□□□□ 0.03
ARCN1P48444 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.24■□□□□ 0.03
ARCN1P48444 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 AL596325.1-201ENST00000563991 1082 ntBASIC15.24■□□□□ 0.03
ARCN1P48444 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.24■□□□□ 0.03
ARCN1P48444 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.24■□□□□ 0.03
ARCN1P48444 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.24■□□□□ 0.03
ARCN1P48444 AC093813.1-201ENST00000605066 256 ntBASIC15.24■□□□□ 0.03
ARCN1P48444 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ARCN1P48444 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 AL035252.4-201ENST00000624174 288 ntBASIC15.24■□□□□ 0.03
ARCN1P48444 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.24■□□□□ 0.03
ARCN1P48444 PRSS30P-206ENST00000641773 873 ntBASIC15.24■□□□□ 0.03
ARCN1P48444 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 AL137783.1-201ENST00000623494 1896 ntBASIC15.24■□□□□ 0.03
ARCN1P48444 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ARCN1P48444 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
ARCN1P48444 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ARCN1P48444 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.24■□□□□ 0.03
ARCN1P48444 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ARCN1P48444 AC026748.1-201ENST00000624349 3251 ntBASIC15.23■□□□□ 0.03
ARCN1P48444 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.23■□□□□ 0.03
ARCN1P48444 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ARCN1P48444 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.23■□□□□ 0.03
ARCN1P48444 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 AC087499.6-201ENST00000411576 835 ntBASIC15.23■□□□□ 0.03
ARCN1P48444 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.23■□□□□ 0.03
ARCN1P48444 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.23■□□□□ 0.03
ARCN1P48444 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.23■□□□□ 0.03
ARCN1P48444 RPL13AP25-201ENST00000484130 612 ntBASIC15.23■□□□□ 0.03
ARCN1P48444 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.23■□□□□ 0.03
ARCN1P48444 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.23■□□□□ 0.03
ARCN1P48444 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ARCN1P48444 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.23■□□□□ 0.03
ARCN1P48444 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.23■□□□□ 0.03
ARCN1P48444 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.23■□□□□ 0.03
ARCN1P48444 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ARCN1P48444 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARCN1P48444 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ARCN1P48444 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ARCN1P48444 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.22■□□□□ 0.03
ARCN1P48444 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.22■□□□□ 0.03
ARCN1P48444 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.22■□□□□ 0.03
ARCN1P48444 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.22■□□□□ 0.03
ARCN1P48444 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.22■□□□□ 0.03
ARCN1P48444 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms