Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 REXO1L1P-201ENST00000379010 6598 ntBASIC13.21□□□□□ -0.29
CBX5P45973 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.21□□□□□ -0.29
CBX5P45973 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CBX5P45973 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CBX5P45973 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.21□□□□□ -0.29
CBX5P45973 ACE3P-201ENST00000423435 1973 ntBASIC13.21□□□□□ -0.29
CBX5P45973 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CBX5P45973 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.21□□□□□ -0.3
CBX5P45973 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CBX5P45973 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CBX5P45973 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.21□□□□□ -0.3
CBX5P45973 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CBX5P45973 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
CBX5P45973 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.21□□□□□ -0.3
CBX5P45973 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CBX5P45973 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CBX5P45973 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.2□□□□□ -0.3
CBX5P45973 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 AC084364.1-201ENST00000551967 1556 ntBASIC13.2□□□□□ -0.3
CBX5P45973 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.2□□□□□ -0.3
CBX5P45973 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 AKAP8P1-201ENST00000434743 1349 ntBASIC13.2□□□□□ -0.3
CBX5P45973 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CBX5P45973 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.2□□□□□ -0.3
CBX5P45973 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.2□□□□□ -0.3
CBX5P45973 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.2□□□□□ -0.3
CBX5P45973 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.2□□□□□ -0.3
CBX5P45973 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 AC079776.4-201ENST00000511039 504 ntBASIC13.2□□□□□ -0.3
CBX5P45973 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 KRT19P2-202ENST00000557173 1012 ntBASIC13.2□□□□□ -0.3
CBX5P45973 AL138918.1-201ENST00000568306 659 ntBASIC13.2□□□□□ -0.3
CBX5P45973 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.2□□□□□ -0.3
CBX5P45973 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.2□□□□□ -0.3
CBX5P45973 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.2□□□□□ -0.3
CBX5P45973 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.2□□□□□ -0.3
CBX5P45973 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.2□□□□□ -0.3
CBX5P45973 AC008267.7-201ENST00000624570 1194 ntBASIC13.2□□□□□ -0.3
CBX5P45973 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.2□□□□□ -0.3
CBX5P45973 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 AC073957.3-201ENST00000609998 6758 ntBASIC13.2□□□□□ -0.3
CBX5P45973 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CBX5P45973 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CBX5P45973 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.19□□□□□ -0.3
CBX5P45973 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 FOXO1B-201ENST00000504678 1527 ntBASIC13.19□□□□□ -0.3
CBX5P45973 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.19□□□□□ -0.3
CBX5P45973 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CBX5P45973 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms