Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A3P43003 AC023310.3-201ENST00000557027 670 ntBASIC14.04□□□□□ -0.16
SLC1A3P43003 AC100756.1-201ENST00000562736 682 ntBASIC14.04□□□□□ -0.16
SLC1A3P43003 RRP7BP-205ENST00000566851 833 ntBASIC14.04□□□□□ -0.16
SLC1A3P43003 AC138749.3-201ENST00000567691 622 ntBASIC14.04□□□□□ -0.16
SLC1A3P43003 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC1A3P43003 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC1A3P43003 AC116165.1-201ENST00000611806 668 ntBASIC14.04□□□□□ -0.16
SLC1A3P43003 AC009118.2-201ENST00000613275 655 ntBASIC14.04□□□□□ -0.16
SLC1A3P43003 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC1A3P43003 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC1A3P43003 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC1A3P43003 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SLC1A3P43003 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A3P43003 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A3P43003 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC1A3P43003 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC1A3P43003 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A3P43003 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A3P43003 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A3P43003 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A3P43003 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
SLC1A3P43003 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC1A3P43003 AC097376.2-205ENST00000610159 5334 ntBASIC14.04□□□□□ -0.16
SLC1A3P43003 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A3P43003 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A3P43003 AC104581.4-201ENST00000623126 3052 ntBASIC14.04□□□□□ -0.16
SLC1A3P43003 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
SLC1A3P43003 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SLC1A3P43003 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SLC1A3P43003 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SLC1A3P43003 RN7SL399P-201ENST00000471648 279 ntBASIC14.03□□□□□ -0.16
SLC1A3P43003 FAM86LP-201ENST00000478302 853 ntBASIC14.03□□□□□ -0.16
SLC1A3P43003 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.03□□□□□ -0.16
SLC1A3P43003 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A3P43003 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
SLC1A3P43003 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC1A3P43003 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A3P43003 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC1A3P43003 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SLC1A3P43003 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SLC1A3P43003 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A3P43003 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A3P43003 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A3P43003 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A3P43003 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A3P43003 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A3P43003 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC1A3P43003 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.02□□□□□ -0.16
SLC1A3P43003 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A3P43003 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SLC1A3P43003 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SLC1A3P43003 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A3P43003 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A3P43003 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A3P43003 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A3P43003 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A3P43003 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A3P43003 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A3P43003 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SLC1A3P43003 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC1A3P43003 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC1A3P43003 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.02□□□□□ -0.17
SLC1A3P43003 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC1A3P43003 GAPDHP40-201ENST00000505218 1006 ntBASIC14.02□□□□□ -0.17
SLC1A3P43003 AC093004.1-201ENST00000508850 424 ntBASIC14.02□□□□□ -0.17
SLC1A3P43003 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC1A3P43003 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC1A3P43003 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms