Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.34□□□□□ -0.27
GDNFP39905 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 MST1P2-201ENST00000457982 2291 ntBASIC13.34□□□□□ -0.27
GDNFP39905 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
GDNFP39905 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.33□□□□□ -0.27
GDNFP39905 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
GDNFP39905 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.33□□□□□ -0.27
GDNFP39905 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GDNFP39905 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
GDNFP39905 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
GDNFP39905 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.33□□□□□ -0.27
GDNFP39905 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.33□□□□□ -0.27
GDNFP39905 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.33□□□□□ -0.27
GDNFP39905 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
GDNFP39905 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
GDNFP39905 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
GDNFP39905 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.33□□□□□ -0.28
GDNFP39905 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.33□□□□□ -0.28
GDNFP39905 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
GDNFP39905 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.33□□□□□ -0.28
GDNFP39905 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.33□□□□□ -0.28
GDNFP39905 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.33□□□□□ -0.28
GDNFP39905 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.33□□□□□ -0.28
GDNFP39905 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.33□□□□□ -0.28
GDNFP39905 KRT8P23-201ENST00000560090 1207 ntBASIC13.33□□□□□ -0.28
GDNFP39905 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
GDNFP39905 AC061975.2-201ENST00000581722 295 ntBASIC13.33□□□□□ -0.28
GDNFP39905 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.33□□□□□ -0.28
GDNFP39905 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.33□□□□□ -0.28
GDNFP39905 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.33□□□□□ -0.28
GDNFP39905 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.33□□□□□ -0.28
GDNFP39905 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDNFP39905 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.33□□□□□ -0.28
GDNFP39905 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.32□□□□□ -0.28
GDNFP39905 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GDNFP39905 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 AC015802.1-201ENST00000588104 1449 ntBASIC13.32□□□□□ -0.28
GDNFP39905 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.32□□□□□ -0.28
GDNFP39905 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
GDNFP39905 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
GDNFP39905 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
GDNFP39905 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 AC004987.2-201ENST00000395959 1148 ntBASIC13.32□□□□□ -0.28
GDNFP39905 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.32□□□□□ -0.28
GDNFP39905 AC211486.1-202ENST00000416371 468 ntBASIC13.32□□□□□ -0.28
GDNFP39905 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.32□□□□□ -0.28
GDNFP39905 AC005237.2-201ENST00000434368 219 ntBASIC13.32□□□□□ -0.28
GDNFP39905 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.32□□□□□ -0.28
GDNFP39905 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.32□□□□□ -0.28
GDNFP39905 AC211476.1-201ENST00000503899 468 ntBASIC13.32□□□□□ -0.28
GDNFP39905 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
GDNFP39905 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.32□□□□□ -0.28
GDNFP39905 RNA5SP410-201ENST00000516285 106 ntBASIC13.32□□□□□ -0.28
GDNFP39905 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.32□□□□□ -0.28
GDNFP39905 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.32□□□□□ -0.28
GDNFP39905 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms