Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19■□□□□ 0.63
COL15A1P39059 AC008805.1-201ENST00000590892 364 ntBASIC19■□□□□ 0.63
COL15A1P39059 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19■□□□□ 0.63
COL15A1P39059 Z98259.2-201ENST00000641583 609 ntBASIC19■□□□□ 0.63
COL15A1P39059 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
COL15A1P39059 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
COL15A1P39059 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL15A1P39059 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
COL15A1P39059 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19■□□□□ 0.63
COL15A1P39059 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
COL15A1P39059 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL15A1P39059 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL15A1P39059 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COL15A1P39059 AC006058.4-201ENST00000624016 1670 ntBASIC18.99■□□□□ 0.63
COL15A1P39059 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
COL15A1P39059 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 RN7SL181P-201ENST00000462921 277 ntBASIC18.99■□□□□ 0.63
COL15A1P39059 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
COL15A1P39059 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.99■□□□□ 0.63
COL15A1P39059 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.99■□□□□ 0.63
COL15A1P39059 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.99■□□□□ 0.63
COL15A1P39059 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.99■□□□□ 0.63
COL15A1P39059 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.99■□□□□ 0.63
COL15A1P39059 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL15A1P39059 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.98■□□□□ 0.63
COL15A1P39059 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 AC023024.2-201ENST00000623561 1993 ntBASIC18.98■□□□□ 0.63
COL15A1P39059 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.98■□□□□ 0.63
COL15A1P39059 AC104784.1-201ENST00000473096 294 ntBASIC18.98■□□□□ 0.63
COL15A1P39059 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 AC005962.1-201ENST00000584100 773 ntBASIC18.98■□□□□ 0.63
COL15A1P39059 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
COL15A1P39059 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.98■□□□□ 0.63
COL15A1P39059 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.98■□□□□ 0.63
COL15A1P39059 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
COL15A1P39059 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.98■□□□□ 0.63
COL15A1P39059 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
COL15A1P39059 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
COL15A1P39059 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
COL15A1P39059 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.98■□□□□ 0.63
COL15A1P39059 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
COL15A1P39059 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.98■□□□□ 0.63
COL15A1P39059 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.98■□□□□ 0.63
COL15A1P39059 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL15A1P39059 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.97■□□□□ 0.63
COL15A1P39059 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL15A1P39059 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.97■□□□□ 0.63
COL15A1P39059 AC012441.2-201ENST00000444843 739 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms