Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP6V1AP38606 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V1AP38606 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP6V1AP38606 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.15■□□□□ 0.66
ATP6V1AP38606 AC078875.1-201ENST00000431907 724 ntBASIC19.15■□□□□ 0.66
ATP6V1AP38606 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 RN7SL818P-201ENST00000485099 259 ntBASIC19.15■□□□□ 0.66
ATP6V1AP38606 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 RN7SL725P-201ENST00000606439 259 ntBASIC19.15■□□□□ 0.66
ATP6V1AP38606 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 MIR6720-201ENST00000611664 98 ntBASIC19.15■□□□□ 0.66
ATP6V1AP38606 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP6V1AP38606 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V1AP38606 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP6V1AP38606 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP6V1AP38606 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP6V1AP38606 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP6V1AP38606 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP6V1AP38606 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 AC105250.1-201ENST00000509378 2057 ntBASIC19.14■□□□□ 0.65
ATP6V1AP38606 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 RN7SL258P-201ENST00000478664 300 ntBASIC19.14■□□□□ 0.65
ATP6V1AP38606 RN7SL67P-201ENST00000492147 296 ntBASIC19.14■□□□□ 0.65
ATP6V1AP38606 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 YRDCP1-201ENST00000621419 643 ntBASIC19.14■□□□□ 0.65
ATP6V1AP38606 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V1AP38606 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ATP6V1AP38606 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V1AP38606 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V1AP38606 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V1AP38606 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V1AP38606 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V1AP38606 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.13■□□□□ 0.65
ATP6V1AP38606 AL109837.1-201ENST00000603272 613 ntBASIC19.13■□□□□ 0.65
ATP6V1AP38606 MIR6842-201ENST00000612539 65 ntBASIC19.13■□□□□ 0.65
ATP6V1AP38606 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms