Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 AL590627.1-203ENST00000421194 1026 ntBASIC12.61□□□□□ -0.39
SNCAP37840 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.61□□□□□ -0.39
SNCAP37840 PHKG1P2-201ENST00000457537 863 ntBASIC12.61□□□□□ -0.39
SNCAP37840 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.61□□□□□ -0.39
SNCAP37840 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.61□□□□□ -0.39
SNCAP37840 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 MIR4313-201ENST00000580760 101 ntBASIC12.61□□□□□ -0.39
SNCAP37840 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.61□□□□□ -0.39
SNCAP37840 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.61□□□□□ -0.39
SNCAP37840 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 AC091812.2-201ENST00000619081 385 ntBASIC12.61□□□□□ -0.39
SNCAP37840 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.61□□□□□ -0.39
SNCAP37840 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SNCAP37840 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 AC011474.4-201ENST00000623523 2076 ntBASIC12.61□□□□□ -0.39
SNCAP37840 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.61□□□□□ -0.39
SNCAP37840 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SNCAP37840 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.61□□□□□ -0.39
SNCAP37840 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.61□□□□□ -0.39
SNCAP37840 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.6□□□□□ -0.39
SNCAP37840 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.6□□□□□ -0.39
SNCAP37840 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.6□□□□□ -0.39
SNCAP37840 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SNCAP37840 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.6□□□□□ -0.39
SNCAP37840 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.6□□□□□ -0.39
SNCAP37840 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 FAM197Y3-203ENST00000618346 717 ntBASIC12.6□□□□□ -0.39
SNCAP37840 AC092865.6-201ENST00000642101 219 ntBASIC12.6□□□□□ -0.39
SNCAP37840 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 AC152010.1-201ENST00000415779 2006 ntBASIC12.6□□□□□ -0.39
SNCAP37840 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms