Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.11■□□□□ 0.01
HMGCLP35914 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.11■□□□□ 0.01
HMGCLP35914 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.11■□□□□ 0.01
HMGCLP35914 AC106886.1-201ENST00000568660 600 ntBASIC15.11■□□□□ 0.01
HMGCLP35914 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 RN7SL48P-201ENST00000579283 293 ntBASIC15.11■□□□□ 0.01
HMGCLP35914 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.11■□□□□ 0.01
HMGCLP35914 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HMGCLP35914 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HMGCLP35914 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 AC063926.2-201ENST00000623766 1308 ntBASIC15.11■□□□□ 0.01
HMGCLP35914 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGCLP35914 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HMGCLP35914 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGCLP35914 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGCLP35914 AC018665.1-201ENST00000622927 1362 ntBASIC15.11■□□□□ 0.01
HMGCLP35914 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HMGCLP35914 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCLP35914 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HMGCLP35914 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCLP35914 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HMGCLP35914 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCLP35914 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMGCLP35914 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCLP35914 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.1■□□□□ 0.01
HMGCLP35914 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.1■□□□□ 0.01
HMGCLP35914 BCRP2-202ENST00000447763 634 ntBASIC15.1■□□□□ 0.01
HMGCLP35914 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HMGCLP35914 BCRP6-201ENST00000510112 632 ntBASIC15.1■□□□□ 0.01
HMGCLP35914 BCRP7-201ENST00000511549 544 ntBASIC15.1■□□□□ 0.01
HMGCLP35914 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCLP35914 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HMGCLP35914 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.1■□□□□ 0.01
HMGCLP35914 AC025279.2-201ENST00000569730 653 ntBASIC15.1■□□□□ 0.01
HMGCLP35914 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.1■□□□□ 0.01
HMGCLP35914 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.1■□□□□ 0.01
HMGCLP35914 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HMGCLP35914 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMGCLP35914 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMGCLP35914 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGCLP35914 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGCLP35914 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HMGCLP35914 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCLP35914 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
HMGCLP35914 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCLP35914 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGCLP35914 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 NFIC-211ENST00000641145 8399 ntBASIC15.09■□□□□ 0.01
HMGCLP35914 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGCLP35914 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGCLP35914 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCLP35914 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
HMGCLP35914 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCLP35914 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCLP35914 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGCLP35914 AC005034.1-201ENST00000426657 489 ntBASIC15.09■□□□□ 0.01
HMGCLP35914 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCLP35914 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms