Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RPA3P35244 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.43■□□□□ 0.06
RPA3P35244 FO393414.2-201ENST00000405153 598 ntBASIC15.43■□□□□ 0.06
RPA3P35244 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 CYMP-203ENST00000474680 1263 ntBASIC15.43■□□□□ 0.06
RPA3P35244 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.43■□□□□ 0.06
RPA3P35244 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 AC027796.2-201ENST00000575326 344 ntBASIC15.43■□□□□ 0.06
RPA3P35244 TEX28P1-201ENST00000613479 1221 ntBASIC15.43■□□□□ 0.06
RPA3P35244 TEX28P2-201ENST00000617764 1221 ntBASIC15.43■□□□□ 0.06
RPA3P35244 MIR6069-201ENST00000620069 79 ntBASIC15.43■□□□□ 0.06
RPA3P35244 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.43■□□□□ 0.06
RPA3P35244 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.43■□□□□ 0.06
RPA3P35244 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.43■□□□□ 0.06
RPA3P35244 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.43■□□□□ 0.06
RPA3P35244 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RPA3P35244 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RPA3P35244 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.43■□□□□ 0.06
RPA3P35244 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RPA3P35244 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.43■□□□□ 0.06
RPA3P35244 AC092135.3-201ENST00000624151 1846 ntBASIC15.43■□□□□ 0.06
RPA3P35244 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
RPA3P35244 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPA3P35244 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RPA3P35244 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.42■□□□□ 0.06
RPA3P35244 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RPA3P35244 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.42■□□□□ 0.06
RPA3P35244 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.42■□□□□ 0.06
RPA3P35244 AC055876.3-201ENST00000431496 288 ntBASIC15.42■□□□□ 0.06
RPA3P35244 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.42■□□□□ 0.06
RPA3P35244 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.42■□□□□ 0.06
RPA3P35244 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.42■□□□□ 0.06
RPA3P35244 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.42■□□□□ 0.06
RPA3P35244 AC138649.4-201ENST00000612222 287 ntBASIC15.42■□□□□ 0.06
RPA3P35244 AL390754.1-201ENST00000619088 582 ntBASIC15.42■□□□□ 0.06
RPA3P35244 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.42■□□□□ 0.06
RPA3P35244 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RPA3P35244 AC152010.1-201ENST00000415779 2006 ntBASIC15.42■□□□□ 0.06
RPA3P35244 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 REXO1L4P-201ENST00000605109 1937 ntBASIC15.42■□□□□ 0.06
RPA3P35244 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.42■□□□□ 0.06
RPA3P35244 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPA3P35244 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.42■□□□□ 0.06
RPA3P35244 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.41■□□□□ 0.06
RPA3P35244 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RPA3P35244 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.41■□□□□ 0.06
RPA3P35244 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RPA3P35244 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RPA3P35244 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.41■□□□□ 0.06
RPA3P35244 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.41■□□□□ 0.06
RPA3P35244 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RPA3P35244 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPA3P35244 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPA3P35244 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RPA3P35244 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPA3P35244 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPA3P35244 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.41■□□□□ 0.06
RPA3P35244 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.41■□□□□ 0.06
RPA3P35244 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.41■□□□□ 0.06
RPA3P35244 AC092580.3-201ENST00000430932 139 ntBASIC15.41■□□□□ 0.06
RPA3P35244 RN7SL618P-201ENST00000477850 296 ntBASIC15.41■□□□□ 0.06
RPA3P35244 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.41■□□□□ 0.06
RPA3P35244 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms