Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HOXC8P31273 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HOXC8P31273 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 TMBIM7P-202ENST00000641474 1516 ntBASIC16.29■□□□□ 0.2
HOXC8P31273 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HOXC8P31273 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC8P31273 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC8P31273 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXC8P31273 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HOXC8P31273 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC8P31273 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.29■□□□□ 0.2
HOXC8P31273 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HOXC8P31273 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HOXC8P31273 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 POU5F1P2-201ENST00000521750 823 ntBASIC16.29■□□□□ 0.2
HOXC8P31273 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC8P31273 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.29■□□□□ 0.2
HOXC8P31273 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HOXC8P31273 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC8P31273 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXC8P31273 AL353726.2-201ENST00000623259 884 ntBASIC16.29■□□□□ 0.2
HOXC8P31273 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXC8P31273 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.29■□□□□ 0.2
HOXC8P31273 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXC8P31273 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
HOXC8P31273 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC8P31273 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HOXC8P31273 LINC01101-201ENST00000622953 1884 ntBASIC16.29■□□□□ 0.2
HOXC8P31273 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HOXC8P31273 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXC8P31273 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
HOXC8P31273 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXC8P31273 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC8P31273 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXC8P31273 AC092978.1-202ENST00000637590 1327 ntBASIC16.28■□□□□ 0.2
HOXC8P31273 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC8P31273 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXC8P31273 AC069218.1-201ENST00000435269 762 ntBASIC16.28■□□□□ 0.2
HOXC8P31273 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC8P31273 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC8P31273 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.28■□□□□ 0.2
HOXC8P31273 AC103691.2-201ENST00000618824 433 ntBASIC16.28■□□□□ 0.2
HOXC8P31273 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HOXC8P31273 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC8P31273 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXC8P31273 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC8P31273 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXC8P31273 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXC8P31273 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HOXC8P31273 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
HOXC8P31273 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HOXC8P31273 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC8P31273 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC8P31273 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC8P31273 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HOXC8P31273 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms