Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LMO1P25800 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.79□□□□□ -0.36
LMO1P25800 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO1P25800 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.79□□□□□ -0.36
LMO1P25800 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO1P25800 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO1P25800 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO1P25800 PRSS30P-206ENST00000641773 873 ntBASIC12.79□□□□□ -0.36
LMO1P25800 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
LMO1P25800 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 SLC7A15P-201ENST00000424028 1363 ntBASIC12.79□□□□□ -0.36
LMO1P25800 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO1P25800 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO1P25800 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 AC067930.6-201ENST00000623257 4947 ntBASIC12.79□□□□□ -0.36
LMO1P25800 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.79□□□□□ -0.36
LMO1P25800 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.79□□□□□ -0.36
LMO1P25800 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LMO1P25800 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LMO1P25800 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 AL928921.2-201ENST00000641325 2442 ntBASIC12.78□□□□□ -0.36
LMO1P25800 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.78□□□□□ -0.36
LMO1P25800 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.78□□□□□ -0.36
LMO1P25800 INGX-202ENST00000489074 768 ntBASIC12.78□□□□□ -0.36
LMO1P25800 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.78□□□□□ -0.36
LMO1P25800 AC055876.2-201ENST00000531834 546 ntBASIC12.78□□□□□ -0.36
LMO1P25800 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.78□□□□□ -0.36
LMO1P25800 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 AL391825.1-201ENST00000457671 1364 ntBASIC12.78□□□□□ -0.36
LMO1P25800 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LMO1P25800 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 BX640514.1-201ENST00000583223 1918 ntBASIC12.78□□□□□ -0.36
LMO1P25800 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO1P25800 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.78□□□□□ -0.36
LMO1P25800 AC068587.6-202ENST00000641839 5619 ntBASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms