Protein–RNA interactions for Protein: P25105

PTAFR, Platelet-activating factor receptor, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFRP25105 AC120045.2-201ENST00000567334 178 ntBASIC13.52□□□□□ -0.25
PTAFRP25105 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.52□□□□□ -0.25
PTAFRP25105 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.52□□□□□ -0.25
PTAFRP25105 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.52□□□□□ -0.25
PTAFRP25105 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTAFRP25105 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
PTAFRP25105 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.52□□□□□ -0.25
PTAFRP25105 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.52□□□□□ -0.25
PTAFRP25105 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTAFRP25105 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PTAFRP25105 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.52□□□□□ -0.25
PTAFRP25105 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.52□□□□□ -0.25
PTAFRP25105 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PTAFRP25105 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
PTAFRP25105 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
PTAFRP25105 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.52□□□□□ -0.25
PTAFRP25105 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTAFRP25105 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTAFRP25105 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.52□□□□□ -0.25
PTAFRP25105 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTAFRP25105 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTAFRP25105 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PTAFRP25105 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTAFRP25105 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
PTAFRP25105 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
PTAFRP25105 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
PTAFRP25105 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PTAFRP25105 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PTAFRP25105 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
PTAFRP25105 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
PTAFRP25105 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 AC112504.1-201ENST00000623415 1841 ntBASIC13.51□□□□□ -0.25
PTAFRP25105 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.51□□□□□ -0.25
PTAFRP25105 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.51□□□□□ -0.25
PTAFRP25105 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PTAFRP25105 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.51□□□□□ -0.25
PTAFRP25105 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PTAFRP25105 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.51□□□□□ -0.25
PTAFRP25105 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.51□□□□□ -0.25
PTAFRP25105 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 ACTG1P3-201ENST00000431775 1114 ntBASIC13.51□□□□□ -0.25
PTAFRP25105 KRT43P-201ENST00000434019 910 ntBASIC13.51□□□□□ -0.25
PTAFRP25105 ATP5G2P4-201ENST00000442175 420 ntBASIC13.51□□□□□ -0.25
PTAFRP25105 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.51□□□□□ -0.25
PTAFRP25105 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 VDAC1P7-201ENST00000462417 847 ntBASIC13.51□□□□□ -0.25
PTAFRP25105 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.51□□□□□ -0.25
PTAFRP25105 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.51□□□□□ -0.25
PTAFRP25105 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.51□□□□□ -0.25
PTAFRP25105 KRT17P8-201ENST00000540749 863 ntBASIC13.51□□□□□ -0.25
PTAFRP25105 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.51□□□□□ -0.25
PTAFRP25105 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.51□□□□□ -0.25
PTAFRP25105 AC009486.1-201ENST00000569860 813 ntBASIC13.51□□□□□ -0.25
PTAFRP25105 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.51□□□□□ -0.25
PTAFRP25105 AC093813.1-201ENST00000605066 256 ntBASIC13.51□□□□□ -0.25
PTAFRP25105 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
PTAFRP25105 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.51□□□□□ -0.25
PTAFRP25105 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.51□□□□□ -0.25
PTAFRP25105 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PTAFRP25105 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
PTAFRP25105 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.51□□□□□ -0.25
PTAFRP25105 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.51□□□□□ -0.25
PTAFRP25105 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.51□□□□□ -0.25
PTAFRP25105 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTAFRP25105 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PTAFRP25105 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PTAFRP25105 AC007292.2-201ENST00000593524 1812 ntBASIC13.5□□□□□ -0.25
PTAFRP25105 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PTAFRP25105 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PTAFRP25105 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTAFRP25105 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PTAFRP25105 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.5□□□□□ -0.25
PTAFRP25105 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTAFRP25105 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTAFRP25105 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
PTAFRP25105 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PTAFRP25105 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTAFRP25105 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.5□□□□□ -0.25
PTAFRP25105 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTAFRP25105 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms