Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
MMP8P22894 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.95■□□□□ 0.14
MMP8P22894 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.95■□□□□ 0.14
MMP8P22894 AC005912.2-201ENST00000619492 2400 ntBASIC15.95■□□□□ 0.14
MMP8P22894 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
MMP8P22894 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.95■□□□□ 0.14
MMP8P22894 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
MMP8P22894 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.95■□□□□ 0.14
MMP8P22894 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.95■□□□□ 0.14
MMP8P22894 AC009486.1-201ENST00000569860 813 ntBASIC15.95■□□□□ 0.14
MMP8P22894 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.95■□□□□ 0.14
MMP8P22894 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.95■□□□□ 0.14
MMP8P22894 RPSAP52-203ENST00000622976 1023 ntBASIC15.95■□□□□ 0.14
MMP8P22894 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.95■□□□□ 0.14
MMP8P22894 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
MMP8P22894 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
MMP8P22894 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.95■□□□□ 0.14
MMP8P22894 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
MMP8P22894 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
MMP8P22894 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 AC007191.1-201ENST00000623179 2995 ntBASIC15.94■□□□□ 0.14
MMP8P22894 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
MMP8P22894 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.94■□□□□ 0.14
MMP8P22894 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.94■□□□□ 0.14
MMP8P22894 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.94■□□□□ 0.14
MMP8P22894 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.94■□□□□ 0.14
MMP8P22894 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.94■□□□□ 0.14
MMP8P22894 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.94■□□□□ 0.14
MMP8P22894 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.94■□□□□ 0.14
MMP8P22894 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.94■□□□□ 0.14
MMP8P22894 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.94■□□□□ 0.14
MMP8P22894 AC092364.2-202ENST00000597012 1073 ntBASIC15.94■□□□□ 0.14
MMP8P22894 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.94■□□□□ 0.14
MMP8P22894 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.94■□□□□ 0.14
MMP8P22894 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.94■□□□□ 0.14
MMP8P22894 AC067930.6-201ENST00000623257 4947 ntBASIC15.94■□□□□ 0.14
MMP8P22894 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.94■□□□□ 0.14
MMP8P22894 AC113367.3-201ENST00000508316 1912 ntBASIC15.94■□□□□ 0.14
MMP8P22894 MSTO2P-201ENST00000314835 1709 ntBASIC15.94■□□□□ 0.14
MMP8P22894 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 LRRC59-203ENST00000576448 1531 ntBASIC15.94■□□□□ 0.14
MMP8P22894 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
MMP8P22894 KRT8P35-201ENST00000483942 1338 ntBASIC15.94■□□□□ 0.14
MMP8P22894 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MMP8P22894 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP8P22894 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
MMP8P22894 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP8P22894 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP8P22894 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
MMP8P22894 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP8P22894 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.93■□□□□ 0.14
MMP8P22894 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP8P22894 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.93■□□□□ 0.14
MMP8P22894 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP8P22894 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.93■□□□□ 0.14
MMP8P22894 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP8P22894 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP8P22894 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP8P22894 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms