Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 AC092127.1-201ENST00000567093 3455 ntBASIC11.76□□□□□ -0.53
RAB4AP20338 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RAB4AP20338 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 IYD-208ENST00000500320 2158 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB4AP20338 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RAB4AP20338 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB4AP20338 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB4AP20338 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB4AP20338 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RAB4AP20338 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB4AP20338 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.75□□□□□ -0.53
RAB4AP20338 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 KRT18P57-201ENST00000443599 1254 ntBASIC11.75□□□□□ -0.53
RAB4AP20338 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.75□□□□□ -0.53
RAB4AP20338 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB4AP20338 AC005412.3-201ENST00000580309 715 ntBASIC11.75□□□□□ -0.53
RAB4AP20338 AL589182.2-201ENST00000619332 1049 ntBASIC11.75□□□□□ -0.53
RAB4AP20338 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB4AP20338 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RAB4AP20338 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 KRT8P44-201ENST00000441609 1350 ntBASIC11.75□□□□□ -0.53
RAB4AP20338 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB4AP20338 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB4AP20338 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB4AP20338 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.75□□□□□ -0.53
RAB4AP20338 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB4AP20338 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
RAB4AP20338 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RAB4AP20338 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB4AP20338 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.75□□□□□ -0.53
RAB4AP20338 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB4AP20338 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RAB4AP20338 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
RAB4AP20338 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC11.74□□□□□ -0.53
RAB4AP20338 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 DRAXINP1-201ENST00000437611 948 ntBASIC11.74□□□□□ -0.53
RAB4AP20338 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 AC107918.2-201ENST00000530817 355 ntBASIC11.74□□□□□ -0.53
RAB4AP20338 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 AC012306.2-201ENST00000609350 630 ntBASIC11.74□□□□□ -0.53
RAB4AP20338 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.74□□□□□ -0.53
RAB4AP20338 AC133561.5-201ENST00000635547 218 ntBASIC11.74□□□□□ -0.53
RAB4AP20338 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RAB4AP20338 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 AC114271.1-201ENST00000612689 2813 ntBASIC11.74□□□□□ -0.53
RAB4AP20338 AP005117.1-201ENST00000584346 1413 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms