Protein–RNA interactions for Protein: P16452

EPB42, Erythrocyte membrane protein band 4.2, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42P16452 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
EPB42P16452 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.87□□□□□ -0.03
EPB42P16452 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.87□□□□□ -0.03
EPB42P16452 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 FAM86LP-201ENST00000478302 853 ntBASIC14.87□□□□□ -0.03
EPB42P16452 GAPDHP40-201ENST00000505218 1006 ntBASIC14.87□□□□□ -0.03
EPB42P16452 DOC2GP-202ENST00000514950 1163 ntBASIC14.87□□□□□ -0.03
EPB42P16452 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.87□□□□□ -0.03
EPB42P16452 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.87□□□□□ -0.03
EPB42P16452 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.87□□□□□ -0.03
EPB42P16452 TPRX2P-201ENST00000535362 881 ntBASIC14.87□□□□□ -0.03
EPB42P16452 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.87□□□□□ -0.03
EPB42P16452 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.87□□□□□ -0.03
EPB42P16452 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.87□□□□□ -0.03
EPB42P16452 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.87□□□□□ -0.03
EPB42P16452 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.87□□□□□ -0.03
EPB42P16452 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
EPB42P16452 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.87□□□□□ -0.03
EPB42P16452 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.87□□□□□ -0.03
EPB42P16452 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.87□□□□□ -0.03
EPB42P16452 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 AC232323.1-201ENST00000540724 2099 ntBASIC14.87□□□□□ -0.03
EPB42P16452 REXO1L5P-201ENST00000622260 2098 ntBASIC14.87□□□□□ -0.03
EPB42P16452 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.87□□□□□ -0.03
EPB42P16452 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.87□□□□□ -0.03
EPB42P16452 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.87□□□□□ -0.03
EPB42P16452 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
EPB42P16452 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 AC067750.1-201ENST00000608826 6545 ntBASIC14.87□□□□□ -0.03
EPB42P16452 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
EPB42P16452 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
EPB42P16452 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPB42P16452 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.86□□□□□ -0.03
EPB42P16452 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EPB42P16452 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.86□□□□□ -0.03
EPB42P16452 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.86□□□□□ -0.03
EPB42P16452 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.86□□□□□ -0.03
EPB42P16452 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 MEP1AP4-201ENST00000423244 1087 ntBASIC14.86□□□□□ -0.03
EPB42P16452 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.86□□□□□ -0.03
EPB42P16452 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.86□□□□□ -0.03
EPB42P16452 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.86□□□□□ -0.03
EPB42P16452 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.86□□□□□ -0.03
EPB42P16452 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.86□□□□□ -0.03
EPB42P16452 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.86□□□□□ -0.03
EPB42P16452 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.86□□□□□ -0.03
EPB42P16452 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
EPB42P16452 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
EPB42P16452 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.86□□□□□ -0.03
EPB42P16452 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.86□□□□□ -0.03
EPB42P16452 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.86□□□□□ -0.03
EPB42P16452 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
EPB42P16452 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.86□□□□□ -0.03
EPB42P16452 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
EPB42P16452 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
EPB42P16452 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPB42P16452 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPB42P16452 LILRP1-201ENST00000444199 1370 ntBASIC14.85□□□□□ -0.03
EPB42P16452 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.85□□□□□ -0.03
EPB42P16452 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
EPB42P16452 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPB42P16452 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms