Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 AC134915.1-201ENST00000426461 574 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 HMGN1P19-201ENST00000436976 333 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 MYCLP2-201ENST00000449268 967 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 RPL13AP25-201ENST00000484130 612 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 AC092552.1-201ENST00000547243 906 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 AL359711.2-201ENST00000563105 872 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 AC120045.2-201ENST00000567334 178 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 AC007431.3-201ENST00000623221 587 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 AL391825.1-201ENST00000457671 1364 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.66□□□□□ -0.22
HLA-DOBP13765 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 AC008494.3-201ENST00000606615 944 ntBASIC13.66□□□□□ -0.22
HLA-DOBP13765 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.66□□□□□ -0.22
HLA-DOBP13765 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 LILRP1-201ENST00000444199 1370 ntBASIC13.66□□□□□ -0.22
HLA-DOBP13765 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DOBP13765 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DOBP13765 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms