Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLTAP09496 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 AC126365.1-201ENST00000578585 1514 ntBASIC16.69■□□□□ 0.26
CLTAP09496 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.69■□□□□ 0.26
CLTAP09496 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.68■□□□□ 0.26
CLTAP09496 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLTAP09496 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
CLTAP09496 AC006486.2-201ENST00000624246 2199 ntBASIC16.68■□□□□ 0.26
CLTAP09496 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.68■□□□□ 0.26
CLTAP09496 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.68■□□□□ 0.26
CLTAP09496 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.68■□□□□ 0.26
CLTAP09496 CICP4-201ENST00000447359 2812 ntBASIC16.68■□□□□ 0.26
CLTAP09496 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 AC104581.4-201ENST00000623126 3052 ntBASIC16.68■□□□□ 0.26
CLTAP09496 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLTAP09496 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.68■□□□□ 0.26
CLTAP09496 OR8S1-201ENST00000310194 1080 ntBASIC16.68■□□□□ 0.26
CLTAP09496 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CLTAP09496 GHSR-202ENST00000427970 912 ntBASIC16.68■□□□□ 0.26
CLTAP09496 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.68■□□□□ 0.26
CLTAP09496 AC114812.1-204ENST00000449669 728 ntBASIC16.68■□□□□ 0.26
CLTAP09496 KRT18P25-201ENST00000508931 1278 ntBASIC16.68■□□□□ 0.26
CLTAP09496 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.68■□□□□ 0.26
CLTAP09496 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CLTAP09496 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.68■□□□□ 0.26
CLTAP09496 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.68■□□□□ 0.26
CLTAP09496 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.68■□□□□ 0.26
CLTAP09496 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CLTAP09496 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.68■□□□□ 0.26
CLTAP09496 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLTAP09496 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLTAP09496 CICP11-201ENST00000434745 2827 ntBASIC16.68■□□□□ 0.26
CLTAP09496 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLTAP09496 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.67■□□□□ 0.26
CLTAP09496 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.67■□□□□ 0.26
CLTAP09496 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.67■□□□□ 0.26
CLTAP09496 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.67■□□□□ 0.26
CLTAP09496 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.67■□□□□ 0.26
CLTAP09496 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLTAP09496 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 AC148477.4-201ENST00000613430 1793 ntBASIC16.67■□□□□ 0.26
CLTAP09496 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLTAP09496 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.67■□□□□ 0.26
CLTAP09496 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLTAP09496 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLTAP09496 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.67■□□□□ 0.26
CLTAP09496 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.67■□□□□ 0.26
CLTAP09496 BCRP2-202ENST00000447763 634 ntBASIC16.67■□□□□ 0.26
CLTAP09496 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.67■□□□□ 0.26
CLTAP09496 BCRP6-201ENST00000510112 632 ntBASIC16.67■□□□□ 0.26
CLTAP09496 BCRP7-201ENST00000511549 544 ntBASIC16.67■□□□□ 0.26
CLTAP09496 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.67■□□□□ 0.26
CLTAP09496 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.67■□□□□ 0.26
CLTAP09496 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.67■□□□□ 0.26
CLTAP09496 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLTAP09496 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLTAP09496 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CLTAP09496 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLTAP09496 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLTAP09496 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms