Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SFTPBP07988 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.33□□□□□ -0.28
SFTPBP07988 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
SFTPBP07988 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 AL035456.1-201ENST00000456064 1369 ntBASIC13.32□□□□□ -0.28
SFTPBP07988 KRT8P12-202ENST00000472924 1397 ntBASIC13.32□□□□□ -0.28
SFTPBP07988 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.32□□□□□ -0.28
SFTPBP07988 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SFTPBP07988 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SFTPBP07988 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SFTPBP07988 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTPBP07988 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.32□□□□□ -0.28
SFTPBP07988 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.32□□□□□ -0.28
SFTPBP07988 UGT1A2P-201ENST00000454886 866 ntBASIC13.32□□□□□ -0.28
SFTPBP07988 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.32□□□□□ -0.28
SFTPBP07988 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SFTPBP07988 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SFTPBP07988 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 MIR4745-201ENST00000577608 62 ntBASIC13.32□□□□□ -0.28
SFTPBP07988 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.32□□□□□ -0.28
SFTPBP07988 AJ011932.1-201ENST00000621707 465 ntBASIC13.32□□□□□ -0.28
SFTPBP07988 AC007191.1-201ENST00000623179 2995 ntBASIC13.32□□□□□ -0.28
SFTPBP07988 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTPBP07988 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.32□□□□□ -0.28
SFTPBP07988 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SFTPBP07988 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SFTPBP07988 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SFTPBP07988 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SFTPBP07988 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTPBP07988 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.32□□□□□ -0.28
SFTPBP07988 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SFTPBP07988 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTPBP07988 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SFTPBP07988 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTPBP07988 AC117489.1-201ENST00000625169 3217 ntBASIC13.32□□□□□ -0.28
SFTPBP07988 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTPBP07988 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SFTPBP07988 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 AC100757.3-201ENST00000622361 1406 ntBASIC13.31□□□□□ -0.28
SFTPBP07988 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 GRK6P1-201ENST00000400595 1711 ntBASIC13.31□□□□□ -0.28
SFTPBP07988 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.31□□□□□ -0.28
SFTPBP07988 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 AC241585.1-201ENST00000433527 519 ntBASIC13.31□□□□□ -0.28
SFTPBP07988 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SFTPBP07988 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 AL589739.1-201ENST00000607720 493 ntBASIC13.31□□□□□ -0.28
SFTPBP07988 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SFTPBP07988 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms