Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM3P06753 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM3P06753 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TPM3P06753 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 CICP8-201ENST00000455800 2813 ntBASIC17.12■□□□□ 0.33
TPM3P06753 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TPM3P06753 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC17.12■□□□□ 0.33
TPM3P06753 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.12■□□□□ 0.33
TPM3P06753 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM3P06753 SPDYE11-202ENST00000450699 704 ntBASIC17.12■□□□□ 0.33
TPM3P06753 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.12■□□□□ 0.33
TPM3P06753 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM3P06753 RNA5SP416-201ENST00000516838 111 ntBASIC17.12■□□□□ 0.33
TPM3P06753 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.12■□□□□ 0.33
TPM3P06753 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.12■□□□□ 0.33
TPM3P06753 SPDYE9P-201ENST00000570642 692 ntBASIC17.12■□□□□ 0.33
TPM3P06753 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.12■□□□□ 0.33
TPM3P06753 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
TPM3P06753 SPDYE10P-202ENST00000612005 668 ntBASIC17.12■□□□□ 0.33
TPM3P06753 SPDYE8P-202ENST00000612377 668 ntBASIC17.12■□□□□ 0.33
TPM3P06753 AC091812.2-201ENST00000619081 385 ntBASIC17.12■□□□□ 0.33
TPM3P06753 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM3P06753 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TPM3P06753 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM3P06753 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TPM3P06753 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM3P06753 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM3P06753 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TPM3P06753 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM3P06753 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM3P06753 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
TPM3P06753 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TPM3P06753 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TPM3P06753 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC17.11■□□□□ 0.33
TPM3P06753 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.11■□□□□ 0.33
TPM3P06753 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TPM3P06753 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.11■□□□□ 0.33
TPM3P06753 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.11■□□□□ 0.33
TPM3P06753 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TPM3P06753 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
TPM3P06753 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TPM3P06753 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM3P06753 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TPM3P06753 GALC-206ENST00000544807 2528 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TPM3P06753 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 FO393414.2-201ENST00000405153 598 ntBASIC17.1■□□□□ 0.33
TPM3P06753 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.1■□□□□ 0.33
TPM3P06753 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.1■□□□□ 0.33
TPM3P06753 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms