Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC012441.1-201ENST00000446669 685 ntBASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AC026434.2-201ENST00000506094 1078 ntBASIC15.4■□□□□ 0.06
HLA-DQB2P05538 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AC068587.3-201ENST00000526613 355 ntBASIC15.4■□□□□ 0.06
HLA-DQB2P05538 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AC132938.2-201ENST00000579188 680 ntBASIC15.4■□□□□ 0.06
HLA-DQB2P05538 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AL591163.1-201ENST00000641757 987 ntBASIC15.4■□□□□ 0.06
HLA-DQB2P05538 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 AC134312.5-201ENST00000568031 1313 ntBASIC15.4■□□□□ 0.06
HLA-DQB2P05538 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DQB2P05538 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 COX5BP8-201ENST00000416911 349 ntBASIC15.39■□□□□ 0.05
HLA-DQB2P05538 TMEM14DP-201ENST00000422205 345 ntBASIC15.39■□□□□ 0.05
HLA-DQB2P05538 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 GIMAP3P-201ENST00000495150 836 ntBASIC15.39■□□□□ 0.05
HLA-DQB2P05538 AC011495.1-201ENST00000498085 584 ntBASIC15.39■□□□□ 0.05
HLA-DQB2P05538 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 PTP4A1P2-201ENST00000546033 454 ntBASIC15.39■□□□□ 0.05
HLA-DQB2P05538 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 IGHV3-72-202ENST00000621503 303 ntBASIC15.39■□□□□ 0.05
HLA-DQB2P05538 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 AC105233.6-201ENST00000642093 218 ntBASIC15.39■□□□□ 0.05
HLA-DQB2P05538 AC063926.3-201ENST00000624734 5658 ntBASIC15.39■□□□□ 0.05
HLA-DQB2P05538 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 NFIC-211ENST00000641145 8399 ntBASIC15.39■□□□□ 0.05
HLA-DQB2P05538 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DQB2P05538 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms