Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.04■□□□□ -0
PCCBP05166 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.04■□□□□ -0
PCCBP05166 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.04■□□□□ -0
PCCBP05166 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 AC026434.2-201ENST00000506094 1078 ntBASIC15.04■□□□□ -0
PCCBP05166 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.04■□□□□ -0
PCCBP05166 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.04■□□□□ -0
PCCBP05166 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PCCBP05166 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.04■□□□□ -0
PCCBP05166 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.04■□□□□ -0
PCCBP05166 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.04■□□□□ -0
PCCBP05166 RN7SL560P-201ENST00000577943 264 ntBASIC15.04■□□□□ -0
PCCBP05166 AC004466.1-201ENST00000599515 1080 ntBASIC15.04■□□□□ -0
PCCBP05166 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 AL162727.3-201ENST00000635661 2787 ntBASIC15.04■□□□□ -0
PCCBP05166 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.04■□□□□ -0
PCCBP05166 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCCBP05166 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PCCBP05166 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.04■□□□□ -0
PCCBP05166 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PCCBP05166 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.03■□□□□ -0
PCCBP05166 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.03■□□□□ -0
PCCBP05166 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.03■□□□□ -0
PCCBP05166 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.03■□□□□ -0
PCCBP05166 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.03■□□□□ -0
PCCBP05166 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCCBP05166 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.03■□□□□ -0
PCCBP05166 PPT1-215ENST00000641471 2368 ntBASIC15.03■□□□□ -0
PCCBP05166 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.03■□□□□ -0
PCCBP05166 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
PCCBP05166 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 TUBB1P2-201ENST00000422712 1306 ntBASIC15.03■□□□□ -0
PCCBP05166 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PCCBP05166 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.03■□□□□ -0
PCCBP05166 TUBB1P1-201ENST00000503144 1300 ntBASIC15.03■□□□□ -0
PCCBP05166 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.03■□□□□ -0
PCCBP05166 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.03■□□□□ -0
PCCBP05166 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PCCBP05166 MIR1908-201ENST00000410394 80 ntBASIC15.03■□□□□ -0
PCCBP05166 POM121L8P-201ENST00000417732 1281 ntBASIC15.03■□□□□ -0
PCCBP05166 FAM8A4P-201ENST00000435433 1213 ntBASIC15.03■□□□□ -0
PCCBP05166 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.03■□□□□ -0
PCCBP05166 POM121L9P-203ENST00000441984 1285 ntBASIC15.03■□□□□ -0
PCCBP05166 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.03■□□□□ -0
PCCBP05166 RPL13AP20-201ENST00000459725 609 ntBASIC15.03■□□□□ -0
PCCBP05166 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.03■□□□□ -0
PCCBP05166 AP000845.1-201ENST00000581677 2131 ntBASIC15.03■□□□□ -0
PCCBP05166 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.03■□□□□ -0
PCCBP05166 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.03■□□□□ -0
PCCBP05166 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.03■□□□□ -0
PCCBP05166 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCCBP05166 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
PCCBP05166 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.03■□□□□ -0
PCCBP05166 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.03■□□□□ -0
PCCBP05166 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.03■□□□□ -0
PCCBP05166 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCCBP05166 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCCBP05166 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
PCCBP05166 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.03■□□□□ -0
PCCBP05166 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.03■□□□□ -0
PCCBP05166 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCCBP05166 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.02■□□□□ -0
PCCBP05166 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.02■□□□□ -0
PCCBP05166 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PCCBP05166 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCCBP05166 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.02■□□□□ -0
PCCBP05166 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms