Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 AC012313.10-201ENST00000623509 926 ntBASIC12.82□□□□□ -0.36
CD74P04233 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
CD74P04233 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
CD74P04233 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 TCAM1P-207ENST00000485295 1537 ntBASIC12.82□□□□□ -0.36
CD74P04233 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.82□□□□□ -0.36
CD74P04233 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CD74P04233 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.81□□□□□ -0.36
CD74P04233 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CD74P04233 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CD74P04233 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.81□□□□□ -0.36
CD74P04233 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.81□□□□□ -0.36
CD74P04233 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.81□□□□□ -0.36
CD74P04233 SPCS2P4-201ENST00000436160 681 ntBASIC12.81□□□□□ -0.36
CD74P04233 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 AC093909.1-201ENST00000504731 1122 ntBASIC12.81□□□□□ -0.36
CD74P04233 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CD74P04233 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.81□□□□□ -0.36
CD74P04233 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.81□□□□□ -0.36
CD74P04233 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.81□□□□□ -0.36
CD74P04233 RARRES2P9-201ENST00000565168 469 ntBASIC12.81□□□□□ -0.36
CD74P04233 AC106730.1-201ENST00000566722 1090 ntBASIC12.81□□□□□ -0.36
CD74P04233 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.81□□□□□ -0.36
CD74P04233 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.81□□□□□ -0.36
CD74P04233 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 AL691432.3-201ENST00000621860 400 ntBASIC12.81□□□□□ -0.36
CD74P04233 AC084121.4-201ENST00000641598 221 ntBASIC12.81□□□□□ -0.36
CD74P04233 AF228730.8-201ENST00000642140 221 ntBASIC12.81□□□□□ -0.36
CD74P04233 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.81□□□□□ -0.36
CD74P04233 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CD74P04233 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CD74P04233 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.81□□□□□ -0.36
CD74P04233 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD74P04233 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CD74P04233 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.8□□□□□ -0.36
CD74P04233 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.8□□□□□ -0.36
CD74P04233 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CD74P04233 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms