Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.02■□□□□ 0.31
GGPS1O95749 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GGPS1O95749 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
GGPS1O95749 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GGPS1O95749 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
GGPS1O95749 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GGPS1O95749 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.02■□□□□ 0.31
GGPS1O95749 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
GGPS1O95749 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
GGPS1O95749 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GGPS1O95749 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 PPT1-215ENST00000641471 2368 ntBASIC17.01■□□□□ 0.31
GGPS1O95749 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.01■□□□□ 0.31
GGPS1O95749 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GGPS1O95749 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.01■□□□□ 0.31
GGPS1O95749 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.01■□□□□ 0.31
GGPS1O95749 MESTP3-201ENST00000503460 968 ntBASIC17.01■□□□□ 0.31
GGPS1O95749 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.01■□□□□ 0.31
GGPS1O95749 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.01■□□□□ 0.31
GGPS1O95749 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GGPS1O95749 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.01■□□□□ 0.31
GGPS1O95749 AL606495.2-201ENST00000605867 535 ntBASIC17.01■□□□□ 0.31
GGPS1O95749 ZACNP1-201ENST00000612259 710 ntBASIC17.01■□□□□ 0.31
GGPS1O95749 AC244157.2-201ENST00000616239 1006 ntBASIC17.01■□□□□ 0.31
GGPS1O95749 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.01■□□□□ 0.31
GGPS1O95749 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GGPS1O95749 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 AC087481.3-201ENST00000602886 1894 ntBASIC17.01■□□□□ 0.31
GGPS1O95749 AL137783.1-201ENST00000623494 1896 ntBASIC17.01■□□□□ 0.31
GGPS1O95749 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.01■□□□□ 0.31
GGPS1O95749 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.01■□□□□ 0.31
GGPS1O95749 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.01■□□□□ 0.31
GGPS1O95749 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 AC018735.1-201ENST00000437208 1502 ntBASIC17.01■□□□□ 0.31
GGPS1O95749 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.01■□□□□ 0.31
GGPS1O95749 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GGPS1O95749 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
GGPS1O95749 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17■□□□□ 0.31
GGPS1O95749 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17■□□□□ 0.31
GGPS1O95749 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17■□□□□ 0.31
GGPS1O95749 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
GGPS1O95749 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17■□□□□ 0.31
GGPS1O95749 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17■□□□□ 0.31
GGPS1O95749 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17■□□□□ 0.31
GGPS1O95749 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17■□□□□ 0.31
GGPS1O95749 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17■□□□□ 0.31
GGPS1O95749 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17■□□□□ 0.31
GGPS1O95749 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17■□□□□ 0.31
GGPS1O95749 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17■□□□□ 0.31
GGPS1O95749 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17■□□□□ 0.31
GGPS1O95749 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17■□□□□ 0.31
GGPS1O95749 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17■□□□□ 0.31
GGPS1O95749 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17■□□□□ 0.31
GGPS1O95749 AL139099.5-201ENST00000635274 300 ntBASIC17■□□□□ 0.31
GGPS1O95749 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17■□□□□ 0.31
GGPS1O95749 TSPY26P-202ENST00000565928 3884 ntBASIC17■□□□□ 0.31
GGPS1O95749 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17■□□□□ 0.31
GGPS1O95749 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17■□□□□ 0.31
GGPS1O95749 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
GGPS1O95749 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms